Pairwise Alignments

Query, 479 a.a., sigma-54 dependent transcriptional regulator (TIGR) from Desulfovibrio vulgaris Hildenborough JW710

Subject, 466 a.a., Fis family transcriptional regulator from Burkholderia phytofirmans PsJN

 Score =  259 bits (661), Expect = 2e-73
 Identities = 160/439 (36%), Positives = 242/439 (55%), Gaps = 24/439 (5%)

Query: 29  LSRSTAG----MKSRLAARAHDIALVDMDILCGGTTTDYETIRQAVHGFRQQHPSVDLIV 84
           L+ +TAG     + +L  +  D+   D+ +  G     +E +             V++IV
Sbjct: 26  LTTATAGDLREARIQLVRQMPDVVFTDLKLPDGSGVDLFEDL--------DPRSGVEVIV 77

Query: 85  LARADAIRQAVDAVRAGAGNYLTYPLHPEEVRLVTQKLHESALVRSELDYLRDRLIQGRS 144
           +     +  AV+A++ GA +YL  P++ + V+ +  +L  +  +++E+  LR  L   R 
Sbjct: 78  ITGHATVESAVNALKMGATDYLVKPINMQRVKAILSRLPRAGDLKAEIGTLRGEL---RR 134

Query: 145 GGDEGIVLDTRSPRMREVYDKIRLVAATRSTVLLTGETGTGKSLIARLIHSHSNRHGKRF 204
            G  G++L   SP M+EVYD+I  VA T ++V+L GE+GTGK + A+ +H  S R    F
Sbjct: 135 MGRFGLMLGN-SPAMQEVYDQIGRVAPTAASVMLVGESGTGKEVAAQTLHQLSLRRKHAF 193

Query: 205 ISVHCGAIPEALVESELFGHEKGAFTGAIRKKPGRFEIAEGGTIFLDEIGTIGPSVQIKL 264
           ++V+CGAI   L+ESE+FGHE+G+FTGA R+  G FE A GGT+FLDEI  +   +Q+KL
Sbjct: 194 LAVNCGAISPNLIESEMFGHERGSFTGADRQHKGYFERANGGTLFLDEITEMPIELQVKL 253

Query: 265 LNVLQDRCFQRVGGETVIRPDVRVVAATNEDLSTLCAQGRFRRDLYYRLNVFPIDIPPLR 324
           L VL+   F RVG    I  DVR++AATN D      +G+ R DLY+RLNVFPI +PPLR
Sbjct: 254 LRVLETGMFMRVGTTKEIETDVRLIAATNRDPEQAVLEGKLRLDLYHRLNVFPISLPPLR 313

Query: 325 ERKEDILQLAEAFVRRCNPQRSRDIRAIHPDVIDAFMRYDWPGNVRELENIIERACILEG 384
           ER +D+  LA+AF+   N + S   +     V D  M Y WPGNVREL+N ++RA I+ G
Sbjct: 314 ERGKDVELLAQAFLDELNERHSTK-KHFPAAVKDMLMSYPWPGNVRELKNYVQRAHIMSG 372

Query: 385 GEVLSPEAFPAEFRGLPHAVRNRALDISLPLEAARRHALDSFEREYLERALATSGGSIKG 444
            +  S    P +   L       A+ I      A        +R+ +   L   GG    
Sbjct: 373 ADSDSTATVPLQIT-LSKPAAGTAITIPFGTSLAEA------DRQLILATLEQCGGVKTR 425

Query: 445 AAAIAGVTTRQIHKLMTRH 463
           AA I G++ + ++  +  +
Sbjct: 426 AAEILGISLKTLYNRLVEY 444