Pairwise Alignments

Query, 275 a.a., ABC transporter, ATP-binding protein (TIGR) from Desulfovibrio vulgaris Hildenborough JW710

Subject, 292 a.a., ABC transporter-related protein (RefSeq) from Shewanella loihica PV-4

 Score =  187 bits (476), Expect = 2e-52
 Identities = 105/240 (43%), Positives = 145/240 (60%), Gaps = 2/240 (0%)

Query: 22  GAQTVHDGLDLDVERGKVLALIGGSGTGKSVLLRTIIGLRRPQGGSIEVLGTDVLHGTSA 81
           G   ++D + L + RGKV A++G SG GK+ LL+ I G  RP  G I+V G DV     +
Sbjct: 41  GTHVIYDDVSLTIPRGKVTAIMGPSGIGKTTLLKLIGGQLRPDSGVIKVDGVDVHKCNRS 100

Query: 82  ALRDLRRRWGVLFQDGALFSSLTVLENIQVPLREFLSLPGDLMDEIAFMKLRMAGLPPGA 141
            L  LR+R  +LFQ GALF+ + V +N+   LRE   LP  ++  I  MKL   GL  GA
Sbjct: 101 ELFALRKRMSMLFQSGALFTDMNVFDNVAFALREHSDLPEAIIRRIVLMKLEAVGLR-GA 159

Query: 142 AHKYPSELSGGMRKRAGLARALVMDPELLFLDEPTAGLDPIGAAAFDDLLAELREALGLT 201
           A   PSELSGGM++RA LARA+ ++PEL+  DEP AG DPI       L+ EL +AL LT
Sbjct: 160 AQMMPSELSGGMQRRAALARAIALEPELVLYDEPFAGQDPISMGVLVKLIRELSDALSLT 219

Query: 202 VVLVTHDLDSLYAVCDKVAVLADRRILKVGTIDELISLDHPWVRDYFTG-PRGRAAQHAP 260
            V+V+HD+  +  + D V VLAD++++  GT  EL + D+P ++ +  G P G    H P
Sbjct: 220 SVVVSHDVQEVLGIADYVYVLADKKVIAHGTPAELKAADNPKLKQFIGGEPDGPVPFHFP 279