Pairwise Alignments
Query, 652 a.a., methyl-accepting chemotaxis protein (TIGR) from Desulfovibrio vulgaris Hildenborough JW710
Subject, 548 a.a., Methyl-accepting chemotaxis protein from Pseudomonas stutzeri RCH2
Score = 301 bits (772), Expect = 4e-86
Identities = 183/395 (46%), Positives = 266/395 (67%), Gaps = 32/395 (8%)
Query: 234 AYEVMGPAMLKAGDLFDGALATHGPAIAASALAVRESYLQEQNA------LGPKVQAAND 287
A+ + PA+ ++G+ D ++ A+A R QE NA LG K Q
Sbjct: 148 AFSELFPALSRSGETVDNLMS--------EAVAFRRDRAQEANAQINAIYLGSKTQ---- 195
Query: 288 MARMVVGVLVVVALLVGIGTAWFLIRSVLAQLGADPAELAGVARRIADGDLTVPF---AG 344
++G L+++A+++G + RS+ L VA +A GDL V +
Sbjct: 196 ----MIG-LILLAVVLGFIIGMLVTRSITRPLN----RAVSVADSLAAGDLGVQLEVNSK 246
Query: 345 EQQRGVYADMKLMAGNLASVIGEVRGGAENVAAGSEQLSASAESLSQGATEQAASIEEIS 404
++ + + M MA L +VI +VR A+++++ SE++SA+++SLSQ A+EQAAS+EE +
Sbjct: 247 DETGRLLSSMNNMAERLRNVISDVRSAADSLSSASEEVSATSQSLSQAASEQAASVEETT 306
Query: 405 ASMEEMTANIRQNMENARQTETIAVQAAVDAESGGKAVTETVVAMRDIADKISIIEEIAR 464
AS+E+M+A+I QN E+A+ T+ IA +AA DA GG+AV + V AM+ IADKI II++IA
Sbjct: 307 ASVEQMSASIAQNTESAKITDNIAGKAANDAVEGGRAVRDMVQAMKQIADKIGIIDDIAY 366
Query: 465 QTNLLALNAAIEAARAGEHGKGFAVVAAEVRKLAERSGAAAAEISDLSASSTAVAERAGE 524
QTNLLALNAAIEAARAG+HGKGFAVVAAEVRKLAERS AA EI ++++S +AE+AG
Sbjct: 367 QTNLLALNAAIEAARAGDHGKGFAVVAAEVRKLAERSQVAAQEIGGVASNSVQLAEQAGS 426
Query: 525 MLTKMVPGIRRTAELVQEIAAASNEQNAGAEQVNKAIAQLDQVIQQNASASEEMASTSEE 584
+L ++VP I++T++LVQEI AAS EQ++GAEQ+N A+ Q++Q+ QQNASASEE+A+TSEE
Sbjct: 427 LLDEIVPNIQKTSDLVQEITAASQEQSSGAEQINIAMGQMNQITQQNASASEELAATSEE 486
Query: 585 LSSQAEQL--QVSVGRFKVSDTDAPARRRPAPARS 617
+++QA QL +S RF ++T + RRP P S
Sbjct: 487 MNAQAGQLLELISFFRFDAANTASQPLRRPVPFAS 521
Score = 40.4 bits (93), Expect = 2e-07
Identities = 109/579 (18%), Positives = 214/579 (36%), Gaps = 103/579 (17%)
Query: 1 MTLARKLIVGFGAVLLLLVIMGGVSFNALSEAVDGFSD--YRRMARGSNLAGDIVEHVLL 58
M + +L +GF V+LL + +G + LSE V G SD Y R G + +++
Sbjct: 7 MKIGARLTLGFLLVVLLTIAVGLLGIRNLSE-VSGLSDLMYERDLTGIDAVHSANYSLIV 65
Query: 59 ----MRVNAVSFHANGEETAAKGFDKSRQDLDATLTKAAETIKNPERARHVKEARDAFTQ 114
+R + ++ +++A K+ D TL KA ++ + + V +
Sbjct: 66 AGRALRGSLLATTVEARDSSAAAAQKALVDTRTTLEKAKKSFHSDQAKALVNRIDEPLAD 125
Query: 115 YAQAFEAMHKVQVEGERQNGIMFDLGPKMQQVVQRMREAAARDVDPSLREKVSDIARLLT 174
Y + + + + + ++A ++ P+L + L++
Sbjct: 126 YERRLNEILSIHLAS-----------------AELAEQSAFSELFPALSRSGETVDNLMS 168
Query: 175 ETRLMTARFMVVRTPETYAAGKAGVPGIES-VLGQLQAAGGPGLREGAHELAQLFRQYMG 233
E F R E A A G ++ ++G + A G G + R
Sbjct: 169 E----AVAFRRDRAQEANAQINAIYLGSKTQMIGLILLAVVLGFIIGMLVTRSITRPLNR 224
Query: 234 AYEVMGPAMLKAGDLFDGALATHGPAIAASALAVRESYLQEQNALGPKVQAANDMARMVV 293
A V ++AA L V + + ++ G + + N+MA +
Sbjct: 225 AVSV-------------------ADSLAAGDLGV-QLEVNSKDETGRLLSSMNNMAERLR 264
Query: 294 GVLVVVALLVGIGTAWFLIRSVLAQLGADPAELAGVARRIADGDLTVPFAGEQQRGVYAD 353
V+ V RS L + E++ ++ ++ A EQ
Sbjct: 265 NVISDV-------------RSAADSLSSASEEVSATSQSLSQA------ASEQ------- 298
Query: 354 MKLMAGNLASVIGEVRGGAENVAAGSEQLSASAESLSQGATEQAASIEEISASMEEMTAN 413
A+ + E E ++A Q + SA+ A + A E ++ +M
Sbjct: 299 --------AASVEETTASVEQMSASIAQNTESAKITDNIAGKAANDAVEGGRAVRDMVQA 350
Query: 414 IRQNMENARQTETIAVQ-------AAVDAESG---GKAVTETVVAMRDIADKISIIEEIA 463
++Q + + IA Q AA++A GK +R +A++ + A
Sbjct: 351 MKQIADKIGIIDDIAYQTNLLALNAAIEAARAGDHGKGFAVVAAEVRKLAERSQV---AA 407
Query: 464 RQTNLLALNAAIEAARAGEHGKGFAVVAAEVRKLAERSGAAAAEISDLSASSTAVAERAG 523
++ +A N+ A +AG + E+ +++ EI+ S ++ AE+
Sbjct: 408 QEIGGVASNSVQLAEQAGS-------LLDEIVPNIQKTSDLVQEITAASQEQSSGAEQIN 460
Query: 524 EMLTKMVPGIRRTAELVQEIAAASNEQNAGAEQVNKAIA 562
+ +M ++ A +E+AA S E NA A Q+ + I+
Sbjct: 461 IAMGQMNQITQQNASASEELAATSEEMNAQAGQLLELIS 499