Pairwise Alignments

Query, 652 a.a., methyl-accepting chemotaxis protein (TIGR) from Desulfovibrio vulgaris Hildenborough JW710

Subject, 551 a.a., Histidine kinase, HAMP region:Bacterial chemotaxis sensory transducer from Pseudomonas syringae pv. syringae B728a

 Score =  326 bits (835), Expect = 2e-93
 Identities = 198/430 (46%), Positives = 281/430 (65%), Gaps = 15/430 (3%)

Query: 227 LFRQYMGAYEVMGPAMLKAGDLFDGALATHGPAIAASALAVRESYLQEQNALGPKVQAAN 286
           LF Q     E    A+LK      G   TH   +      + E         G K  +  
Sbjct: 133 LFDQSRQNLEAQARALLK------GESKTHFDEVTTQLQKMVELNEAGATIAGNKGTSLY 186

Query: 287 DMARMVVGVLVVVALLVGIGTAWFLIRSVLAQLGADPAELAGVARRIADGDLT--VPFAG 344
           + +R+ + V+++ ALL+G+G A F+ R +   L     E A  A ++A+G+L   +    
Sbjct: 187 ETSRISIIVVLIAALLIGLGLALFIARIISRPL----KEAATAAEQLAEGNLNAHIGHGS 242

Query: 345 EQQRGVYAD-MKLMAGNLASVIGEVRGGAENVAAGSEQLSASAESLSQGATEQAASIEEI 403
             + G+  + M+ M G L+ +IGEVR  A+N+A+ SE++SA+A+S+SQ  +EQAAS+EE 
Sbjct: 243 RDETGMVLNAMRNMVGKLSHIIGEVRNAADNLASASEEVSATAQSMSQATSEQAASVEET 302

Query: 404 SASMEEMTANIRQNMENARQTETIAVQAAVDAESGGKAVTETVVAMRDIADKISIIEEIA 463
           SAS+E+M+A+I QN ENA+ T+ +A +AA +A  GG++V +TVVAM+ IA +ISII++IA
Sbjct: 303 SASVEQMSASINQNTENAKVTDGMASKAAKEATDGGESVQQTVVAMKKIAQRISIIDDIA 362

Query: 464 RQTNLLALNAAIEAARAGEHGKGFAVVAAEVRKLAERSGAAAAEISDLSASSTAVAERAG 523
            QTNLLALNAAIEAARAGEHGKGFAVVAAEVRKLAERS  AA EI +LS+SS  +AE+AG
Sbjct: 363 YQTNLLALNAAIEAARAGEHGKGFAVVAAEVRKLAERSQVAAQEIGELSSSSVDMAEKAG 422

Query: 524 EMLTKMVPGIRRTAELVQEIAAASNEQNAGAEQVNKAIAQLDQVIQQNASASEEMASTSE 583
           ++L +MVP I +T++LVQEI+AAS EQ AG  Q+N A+ QL+QV QQNAS+SEE+A+T+E
Sbjct: 423 KLLDEMVPSINKTSDLVQEISAASEEQAAGVAQINTAMTQLNQVTQQNASSSEELAATAE 482

Query: 584 ELSSQAEQLQVSVGRFKV-SDTDAPARRRPAPARSGAVAHQPARPASGRKGAGAVSLDLD 642
           E+SSQAEQLQ ++  F + +   A A+     +R+      P  P    + A A S+   
Sbjct: 483 EMSSQAEQLQQAMSFFTLDASPRAVAQSATVDSRNSPNRQPPRPPQQAPRKAFAQSM-AG 541

Query: 643 GDDDSDFERY 652
             D+S+F R+
Sbjct: 542 APDESEFTRF 551



 Score = 39.3 bits (90), Expect = 5e-07
 Identities = 98/490 (20%), Positives = 164/490 (33%), Gaps = 80/490 (16%)

Query: 1   MTLARKLIVGFGAVLLLLVIMGGVSFNALSEAVDGFSDYR-------------------- 40
           + ++ KLI  F  VL L   MG  +   L +      D +                    
Sbjct: 7   LKISTKLITSFLVVLALTAAMGVFAIIQLGQVNQAAQDIKENWMPSMRAAAGMRFFAANY 66

Query: 41  RMARGSNLAGDIVEHVLLMRVNAVSFHANGEETAAKGFDKSRQDLDATLTKAAETIKNPE 100
           R+    ++A D  +    M + A       E   A        D D  L  +        
Sbjct: 67  RLKENRHIAADTAQEKAQMELEAADSRKQFETRLAIYDKLISSDDDRQLFNSVSA----S 122

Query: 101 RARHVKEARDAFTQYAQAFEAMHKVQVEGERQNGIMFDLGPKMQQVVQRMREAAAR---D 157
            A ++K + D F Q  Q  EA  +  ++GE +    FD      Q +  + EA A    +
Sbjct: 123 WAAYLKVSNDLFDQSRQNLEAQARALLKGESKT--HFDEVTTQLQKMVELNEAGATIAGN 180

Query: 158 VDPSLRE--KVSDIARLLTETRLMTARFMVVRTPETYAAGKAGVPGIESVLGQLQAAGGP 215
              SL E  ++S I  L+    +     + +    +    +A     +   G L A  G 
Sbjct: 181 KGTSLYETSRISIIVVLIAALLIGLGLALFIARIISRPLKEAATAAEQLAEGNLNAHIGH 240

Query: 216 GLREGAHELAQLFRQYMGAY-----EVMGPA--MLKAGDLFDGALATHGPAIAASALAVR 268
           G R+    +    R  +G       EV   A  +  A +       +   A +  A +V 
Sbjct: 241 GSRDETGMVLNAMRNMVGKLSHIIGEVRNAADNLASASEEVSATAQSMSQATSEQAASVE 300

Query: 269 ESYLQ--------EQNALGPKV------QAANDMARMVVGVLVVVALLVGIGTAWFLIRS 314
           E+            QN    KV      +AA +       V   V  +  I     +I  
Sbjct: 301 ETSASVEQMSASINQNTENAKVTDGMASKAAKEATDGGESVQQTVVAMKKIAQRISIIDD 360

Query: 315 VLAQL-----------------GADPAELAGVARRIADGDLTVPFAGEQQRGVYADMKLM 357
           +  Q                  G   A +A   R++A+          +      DM   
Sbjct: 361 IAYQTNLLALNAAIEAARAGEHGKGFAVVAAEVRKLAERSQVAAQEIGELSSSSVDMAEK 420

Query: 358 AGNL-----------ASVIGEVRGGAENVAAGSEQLSASAESLSQGATEQAASIEEISAS 406
           AG L           + ++ E+   +E  AAG  Q++ +   L+Q   + A+S EE++A+
Sbjct: 421 AGKLLDEMVPSINKTSDLVQEISAASEEQAAGVAQINTAMTQLNQVTQQNASSSEELAAT 480

Query: 407 MEEMTANIRQ 416
            EEM++   Q
Sbjct: 481 AEEMSSQAEQ 490