Pairwise Alignments

Query, 652 a.a., methyl-accepting chemotaxis protein (TIGR) from Desulfovibrio vulgaris Hildenborough JW710

Subject, 733 a.a., methyl-accepting chemotaxis protein from Rhodopseudomonas palustris CGA009

 Score =  320 bits (819), Expect = 2e-91
 Identities = 262/735 (35%), Positives = 377/735 (51%), Gaps = 88/735 (11%)

Query: 1   MTLARKLIVGFGAVLLLLVIMGGVSF---NALSEAVDGF-SDYRRMARGSNLAGDIVEHV 56
           +T+  KL   FG V+LL  I GG+++     L+E  +G  S  +R+ +   L  +I+   
Sbjct: 3   LTVKAKLAGAFGVVILLSAITGGIAYVKLTQLAETSEGLVSRSQRIDKAGELQNNILYQT 62

Query: 57  LLMR-VNAVSFHANGEETA--AKGFDKS----RQDLDATLTKAAE--------------- 94
              R +   S  A  ++ A   K + K     R ++ A  T+A +               
Sbjct: 63  RAQRDIIIASTDAELQKVADEVKQYRKDALRIRDEIAAVATEAGKRMIEKFSTAYDKMNA 122

Query: 95  ---------TIKNPERARHV--KEARDAFTQYAQAFEAM----HKVQVEGERQNGIMFDL 139
                    T+ +  R   +   E       +++A E+      K+ V  ER N ++  L
Sbjct: 123 TEDQIIKFGTLNSNNRGAQLWTSEGAPVVKDWSEAVESSLAEARKLPVSAERANALISIL 182

Query: 140 GPKMQ-QVVQR-----MREAAARDVDPSLREKVSDIARLLTETRLMTARFMVV------- 186
             +   + VQ+        +   D+  +++       RL + ++   A    V       
Sbjct: 183 SIRADGEAVQKDLALSFYASNLEDLSSTIKALGDATERLRSSSQQSVAALSAVGLSSSAI 242

Query: 187 -RTPETYAAGKAGVPGIESVLGQLQAAGGPGLREGAHELA--QLFRQYMGAYEVMGPAML 243
               E +A     V  I    G ++AA   G    A  +   Q    Y+   +     M 
Sbjct: 243 TSQSERFAKIAGRVSDIVKEGGNIRAAALAGTEGRATSMVAIQAATDYVNYVKKAMAEMS 302

Query: 244 K--AGDLFDGALATHGPAIAASALAVRESY---LQEQNALGPKVQAANDMARMVVGVLVV 298
           +  A D  +  L      IA+   AV  +    +     L   V+ AN +A   +G L  
Sbjct: 303 EQAASDAANAKLLLISIVIASLLAAVASALWIAINISRGLAQAVELANAVA---IGDLSH 359

Query: 299 VALLVGIGTAWFLIRSVLAQLGADPAELAGVARRIADGDLTVPFAGEQQRGVYA-DMKLM 357
                       L++S+ A + A+    AGVA  IA G+LT+      ++      ++ M
Sbjct: 360 KINSTSDDEVGDLVKSLNA-MTANLNATAGVADEIARGNLTIEAKRLSEKDTLGIALEQM 418

Query: 358 AGNLASVIGEVRGGAENVAAGSEQLSASAESLSQGATEQAASIEEISASMEEMTANIRQN 417
              L  ++ E    A+NV+AGS++LSASAE LSQGATEQA+S EE S+SMEEM ANI+QN
Sbjct: 419 VEKLRQIVSEALTAAQNVSAGSQELSASAEQLSQGATEQASSAEEASSSMEEMAANIKQN 478

Query: 418 MENARQTETIAVQAAVDAESGGKAVTETVVAMRDIADKISIIEEIARQTNLLALNAAIEA 477
            ENA QTE IA Q+A DAE+ G AV   V AM+ IA+KI+I++EIARQT+LLALNAA+EA
Sbjct: 479 AENASQTEKIAAQSAKDAEASGAAVGRAVEAMQTIAEKITIVQEIARQTDLLALNAAVEA 538

Query: 478 ARAGEHGKGFAVVAAEVRKLAERSGAAAAEISDLSASSTAVAERAGEMLTKMVPGIRRTA 537
           ARAGEHGKGFAVVA+EVRKLAERS A+A EI +LS  +  VA+ AGEML K+VP I++T+
Sbjct: 539 ARAGEHGKGFAVVASEVRKLAERSQASATEIGELSGETVKVAQEAGEMLAKLVPDIKKTS 598

Query: 538 ELVQEIAAASNEQNAGAEQVNKAIAQLDQVIQQNASASEEMASTSEELSSQAEQLQVSVG 597
           ELVQEI++A  EQ+ G+ Q+N+AI QLD+V QQNASASE+++STSEEL+SQAEQLQ ++ 
Sbjct: 599 ELVQEISSACREQDVGSSQINQAIQQLDKVGQQNASASEQVSSTSEELASQAEQLQSTIA 658

Query: 598 RFKVSDTDAPARRRP---------------APARSGAVAHQPARP-----ASGRKGAGAV 637
            F++    A A   P               A    G    Q A+P     A+G  G  A 
Sbjct: 659 FFRIDQDKAKAHGAPIDKAVNQLRAKAAHMASVDRGTKKPQAAKPQRQLKAAGGGGGFAF 718

Query: 638 SL-DLDGDDDSDFER 651
           +L D + D D+DF+R
Sbjct: 719 ALGDGEDDRDADFQR 733