Pairwise Alignments

Query, 652 a.a., methyl-accepting chemotaxis protein (TIGR) from Desulfovibrio vulgaris Hildenborough JW710

Subject, 597 a.a., methyl-accepting chemotaxis sensory transducer (RefSeq) from Desulfovibrio vulgaris Miyazaki F

 Score =  342 bits (877), Expect = 3e-98
 Identities = 208/398 (52%), Positives = 269/398 (67%), Gaps = 38/398 (9%)

Query: 284 AANDMARMVVGVLVVVALLVGIGTAWFLIRSVLAQLGADPAE-LAGVARRIADGDLT--V 340
           AA  +    +G++ VV     +  AW L    +A+    P E +  VA ++A GDLT  V
Sbjct: 209 AALSVTGWALGIVAVV-----VSCAWLLASRSIAR----PLERIRDVAGQVASGDLTADV 259

Query: 341 PFAGEQQRGVYAD-MKLMAGNLASVIGEVRGGAENVAAGSEQLSASAESLSQGATEQAAS 399
             +   + G  A+ ++ M GNL  VIGEV      V AGS +LS +A S++QGATEQA++
Sbjct: 260 EVSSRDEVGSVAEAIRTMTGNLRRVIGEVMETTRGVTAGSRELSETAVSMAQGATEQASA 319

Query: 400 IEEISASMEEMTANIRQNMENARQTETIAVQAAVDAESGGKAVTETVVAMRDIADKISII 459
           +EE+SAS+E+MT+NI+QN ENA +T+ IA+++A DA  GG+AV +TV AM+ IA+KISI+
Sbjct: 320 VEEVSASVEQMTSNIQQNAENAAETDRIALRSAEDAREGGQAVAQTVRAMKTIAEKISIV 379

Query: 460 EEIARQTNLLALNAAIEAARAGEHGKGFAVVAAEVRKLAERSGAAAAEISDLSASSTAVA 519
           +EIARQTNLLALNAAIEAARAGEHGKGFAVVA+EVRKLAERSG AAAEI +LS+SS A+A
Sbjct: 380 QEIARQTNLLALNAAIEAARAGEHGKGFAVVASEVRKLAERSGTAAAEIGELSSSSVALA 439

Query: 520 ERAGEMLTKMVPGIRRTAELVQEIAAASNEQNAGAEQVNKAIAQLDQVIQQNASASEEMA 579
           ERAG ML  +VP I++TAELVQEIAA S EQ+ GAEQ+NKA+ QLD VIQQNASASE MA
Sbjct: 440 ERAGSMLGTLVPSIQKTAELVQEIAAGSKEQSVGAEQINKAVQQLDSVIQQNASASEMMA 499

Query: 580 STSEELSSQAEQLQVSVGRFKV-SDTDAPARRRPAPA--------RSGAVAHQPAR---- 626
           +TSEEL+ QA QL  +V  F++ +   AP+  RP P+        + G    +P R    
Sbjct: 500 ATSEELAGQATQLAQTVAFFRLPAGGGAPSMGRPVPSVQPVQPNHKGGLEIRRPQRAHPS 559

Query: 627 ----------PASGRKGAGAVSLDLD--GDDDSDFERY 652
                       S R G   V+L+LD     D+DFERY
Sbjct: 560 AAITGGGLPGDRSARAGQSGVTLELDEAATSDADFERY 597