Pairwise Alignments

Query, 652 a.a., methyl-accepting chemotaxis protein (TIGR) from Desulfovibrio vulgaris Hildenborough JW710

Subject, 659 a.a., methyl-accepting chemotaxis sensory transducer (RefSeq) from Desulfovibrio vulgaris Miyazaki F

 Score =  668 bits (1723), Expect = 0.0
 Identities = 384/661 (58%), Positives = 465/661 (70%), Gaps = 11/661 (1%)

Query: 1   MTLARKLIVGFGAVLLLLVIMGGVSFNALSEAVDGFSDYRRMARGSNLAGDIVEHVLLMR 60
           MTLA+KLI+GFG VL+LLV MGG+S+ ALS+A  GFSDYRR ARGS ++G+I+  +L MR
Sbjct: 1   MTLAKKLILGFGLVLVLLVAMGGISYKALSDATLGFSDYRRTARGSLMSGEIMSSMLQMR 60

Query: 61  VNAVSFHANGEETAAKGFDKSRQDLDATLTKAAETIKNPERARHVKEARDAFTQYAQAFE 120
           +  +SF     E A + ++ +R +L   L +A + +KNP R +H+    +A  QYA   +
Sbjct: 61  LGVLSFMNTSSEAALRSYEDARAELAKGLDEADKNMKNPARRKHLATVAEALAQYAAGVD 120

Query: 121 AMHKVQVEGERQNGIMFDLGPKMQQVVQRMREAAARDVDPSLREKVSDIARLLTETRLMT 180
            +HK     + +   +  +GP+  Q + ++ EAA R+ D     +   + R + E RL  
Sbjct: 121 ELHKYDQTRQDEIRTLNTMGPQRVQALAQLAEAAQREGDVVGAARAEAVMRAMLELRLAV 180

Query: 181 ARFMVVRTPETYAAGKAGVPGIESVLGQLQA-AGGPGLREGAHELAQLFRQYMGAYEVMG 239
            + M     +     K     +     +L A    P LR+ A EL Q    Y  A+E M 
Sbjct: 181 VKMMADTDVKWLEQAKQEAVLVGEAFNRLIADVRNPVLRDKARELYQQRTDYFSAFERMS 240

Query: 240 PAMLKAGDLFDGALATHGPAIAASALAVRESYLQEQNALGPKVQAANDMARMVVGVLVVV 299
            A LK   +++  LA  GPAIA +  A++ SY  EQN +GP+VQA+ND A+M+ GV+ +V
Sbjct: 241 AAALKRDAVYNERLAKLGPAIAQACDAIQNSYEAEQNEIGPRVQASNDQAQMLTGVIALV 300

Query: 300 ALLVGIGTAWFLIRSVLAQLGADPAELAGVARRIADGDLTVPF--AGEQQRGVYADMKLM 357
           A+L G+  AW LIR V+AQLGADPA LA V RRIA GDL V F  A  + RGVYADMK M
Sbjct: 301 AVLSGVTIAWLLIRVVMAQLGADPAALAAVTRRIAAGDLDVSFNAASGKLRGVYADMKDM 360

Query: 358 AGNLASVIGEVRGGAENVAAGSEQLSASAESLSQGATEQAASIEEISASMEEMTANIRQN 417
              L SVI EVR GAENVA+GSE+LSASAE+LSQGATEQAASIEEIS+SMEEM ANIRQN
Sbjct: 361 VDGLVSVITEVRSGAENVASGSEELSASAETLSQGATEQAASIEEISSSMEEMAANIRQN 420

Query: 418 MENARQTETIAVQAAVDAESGGKAVTETVVAMRDIADKISIIEEIARQTNLLALNAAIEA 477
           MENARQTETIA QAA DAE GGKAV +TV AMR+IA KISIIEEIARQTNLLALNAAIEA
Sbjct: 421 MENARQTETIATQAATDAEGGGKAVGDTVGAMREIAAKISIIEEIARQTNLLALNAAIEA 480

Query: 478 ARAGEHGKGFAVVAAEVRKLAERSGAAAAEISDLSASSTAVAERAGEMLTKMVPGIRRTA 537
           ARAGEHGKGFAVVAAEVRKLAERSG AAAEIS+LS+SS AVAE AG MLTKMVPGIRRTA
Sbjct: 481 ARAGEHGKGFAVVAAEVRKLAERSGQAAAEISELSSSSVAVAEHAGAMLTKMVPGIRRTA 540

Query: 538 ELVQEIAAASNEQNAGAEQVNKAIAQLDQVIQQNASASEEMASTSEELSSQAEQLQVSVG 597
           ELVQEIAAASNEQN GAEQVNKAIAQLDQVIQQNASASEEMASTSEELSSQAEQLQ +V 
Sbjct: 541 ELVQEIAAASNEQNVGAEQVNKAIAQLDQVIQQNASASEEMASTSEELSSQAEQLQATVS 600

Query: 598 RFKVSDTD-----APARRRPAPARSGAVAHQPARPASGRKGAGAVSLDLDGD-DDSDFER 651
           RF+V+  D      P R +P  A        P +  +G+   G ++LD+D D DDS+FER
Sbjct: 601 RFRVAALDDGLVRTPRRAQPKVAPRAVAGQAPRKAVTGK--GGHIALDMDADADDSEFER 658

Query: 652 Y 652
           +
Sbjct: 659 F 659