Pairwise Alignments

Query, 652 a.a., methyl-accepting chemotaxis protein (TIGR) from Desulfovibrio vulgaris Hildenborough JW710

Subject, 646 a.a., methyl-accepting chemotaxis protein (NCBI ptt file) from Shewanella oneidensis MR-1

 Score =  389 bits (998), Expect = e-112
 Identities = 243/658 (36%), Positives = 385/658 (58%), Gaps = 22/658 (3%)

Query: 1   MTLARKLIVGFGAVLLLLVIMGGVSFNALSEAVDGFSDYRRMARGSNLAGDIVEHVLLMR 60
           +TL+ ++  G+  VLLLLV++   ++  L++A++GFSDYR +AR SN+AG +  ++L ++
Sbjct: 5   LTLSMQISGGYALVLLLLVVISLAAYFGLTKAINGFSDYRALARDSNMAGRVQANMLTIQ 64

Query: 61  VNAVSFHANGEETAAKGFDKSRQDLDATLTKAAETIKNPERARHVKEARDAFTQYAQAFE 120
           + A  +    +E+A K F++    ++  + KA   I +PE ++ + + R     Y   FE
Sbjct: 65  IQAYDYIFQKKESAYKVFNERNVIVNDIIQKAMTDINDPELSQQISDIRKDIVDYNSYFE 124

Query: 121 AMHKVQVEGERQNGIMFDLGPKMQQVVQRMREAAARDVDPSLRE---KVSDIARLLTETR 177
           ++  V++   R + +   L P   +VV+ + +A  +  +    E   +   +   +   R
Sbjct: 125 SV--VKLIKSRNDEVTNVLVPNGSEVVKLISDAMHQSFNKGQIEVAYRAGSVLESVLSAR 182

Query: 178 LMTARFMVVRTPETYAAGKAGVPGIESV-LGQLQAAGGP-GLREGAHELAQLFRQYMGAY 235
           L  ++F+              +   +   L  L+AA      +    +       Y  + 
Sbjct: 183 LAASKFLETNLDADLQQALMAIDLAKGERLSALKAAATDLDTQSKLVQFTSSIDNYASSL 242

Query: 236 EVMGPAMLKAGDLFDGALATHGPAIAASALAVRESYLQEQNALGPKVQAANDMARMVVGV 295
           + +   + +  D+    L   G  ++     ++ +  + Q+ALGP V+  N+     V  
Sbjct: 243 KSVYNTINERNDIVKNQLDRIGLDVSRQTEDIKLTIQKRQDALGPLVKVQNEQTLTTVIS 302

Query: 296 LVVVALLVGIGTAWFLIRSVLAQLGADPAELAGVARRIADGDLTVPFAG-EQQRGVYADM 354
           + + A+ +GI  AWFL++ +   LG +P ++  +AR IA+GDLT+     EQ  GVY  M
Sbjct: 303 VSIAAIFIGIFLAWFLVKLIKKPLGGEPRDMETIARAIANGDLTIELKQREQATGVYKAM 362

Query: 355 KLMAGNLASVIGEVRGGAENVAAGSEQLSASAESLSQGATEQAASIEEISASMEEMTANI 414
             M  +L SVI +VR GA+N+++ S Q+S++A+SLSQGATEQAAS+EE ++++EE+ A++
Sbjct: 363 IDMIDSLTSVIAQVRSGADNLSSASSQVSSTAQSLSQGATEQAASVEETTSAVEELNASV 422

Query: 415 RQNMENARQTETIAVQAAVDAESGGKAVTETVVAMRDIADKISIIEEIARQTNLLALNAA 474
           +QN ENAR T  +A  AA +A  GG AV +TV AM+ IA KIS+IE+IA +TNLL+LNAA
Sbjct: 423 QQNSENARVTNNMATVAAEEARQGGIAVEQTVAAMKQIAAKISLIEDIAYKTNLLSLNAA 482

Query: 475 IEAARAGEHGKGFAVVAAEVRKLAERSGAAAAEISDLSASSTAVAERAGEMLTKMVPGIR 534
           IEAARAGEHGKGF VVA+EVRKLAE S   A EI+ L++ S  +AE AG ++  +VP I+
Sbjct: 483 IEAARAGEHGKGFTVVASEVRKLAENSSLTAQEINKLASDSVGIAENAGRLIANIVPNIQ 542

Query: 535 RTAELVQEIAAASNEQNAGAEQVNKAIAQLDQVIQQNASASEEMASTSEELSSQAEQLQV 594
           +T++LVQEI+++S EQ  G  Q+N ++ QLD+  QQNASASEE+A+TSEEL+ QA QL  
Sbjct: 543 KTSDLVQEISSSSEEQAIGISQINDSMLQLDKATQQNASASEELAATSEELNGQANQLLD 602

Query: 595 SVGRFKVSDTDAPARRRPAPARSGAVAHQPARPASGRKGAGAVSLDLDGDDDSDFERY 652
           +V  FK+    A +  RP   +S  +       AS RK A A        + +DFER+
Sbjct: 603 AVEFFKL----AISSERPHQGKSTHMT------ASVRKTAKA----KQHVERADFERF 646