Pairwise Alignments

Query, 226 a.a., HmcE, 25.3 kd protein in hmc operon (voordouw) from Desulfovibrio vulgaris Hildenborough JW710

Subject, 226 a.a., hmc operon protein 5 (RefSeq) from Desulfovibrio vulgaris Miyazaki F

 Score =  404 bits (1038), Expect = e-118
 Identities = 193/226 (85%), Positives = 208/226 (92%)

Query: 1   MYAFLTGPMLWASLLVFFGGLLARVIWYIRGLDWRLDRVAYKPHLAIGLQGAVQSALKWL 60
           MYAFLTGPMLW +LLVFFGGL ARV+WY+RGL W+LDRVAY PHLA GL+G + SALKW+
Sbjct: 1   MYAFLTGPMLWVALLVFFGGLAARVVWYVRGLSWQLDRVAYGPHLAHGLKGGIHSALKWM 60

Query: 61  VPFGTYSWRQQPFFTVAFFLFHIGAVLVPLFLAGHNVILEERFGFSLPALPMGVADTLTV 120
           +PFGT SWR+QP+F VAFFLFHIGAVLVPLFLAGHN+IL ERFGFSLPALPMG+AD LTV
Sbjct: 61  LPFGTQSWREQPYFAVAFFLFHIGAVLVPLFLAGHNIILAERFGFSLPALPMGIADALTV 120

Query: 121 LAIIGLVMIALRRIALTEVRILTTGYDWFILAVSAAPFVTGFLARLHVGDYDTWLLAHII 180
            AIIGLVMIALRRIALTEVRILTT YDWFILAVSAAPFVTGF+ARLHV +YD WLLAHII
Sbjct: 121 AAIIGLVMIALRRIALTEVRILTTAYDWFILAVSAAPFVTGFVARLHVANYDAWLLAHII 180

Query: 181 TGELFLIVAPFTKLSHIVLFFMSRGQLGMDYAIKRGGATRGPAFPW 226
           TGEL LIVAPFTKLSHIVLFFMSRGQLGMDYAIKRGG +RG AFPW
Sbjct: 181 TGELLLIVAPFTKLSHIVLFFMSRGQLGMDYAIKRGGYSRGAAFPW 226