Pairwise Alignments

Query, 523 a.a., flagellar hook-associated protein FlgL, putative (TIGR) from Desulfovibrio vulgaris Hildenborough JW710

Subject, 298 a.a., flagellin domain protein (RefSeq) from Desulfovibrio vulgaris Miyazaki F

 Score = 62.8 bits (151), Expect = 2e-14
 Identities = 41/136 (30%), Positives = 65/136 (47%), Gaps = 1/136 (0%)

Query: 3   VSQRMMYQNFLGNMNSSLADLVESNIQSSSQKQINRPSDDPVGMARVLNYRASLGDVEQY 62
           ++  MM  N   N+N S   L  S  + SS  ++   +DD  G+A     RA +  + Q 
Sbjct: 5   INHNMMALNASRNLNESYGRLATSTRRLSSGLRVGTAADDAAGLAIRELMRADISTMRQG 64

Query: 63  KKNVDTAKGWLNLADSTLTSMNTVLTRIKGLAEQAATSSVSPENRKQISFELRQQYEQLI 122
            +N + A   +  AD  L  ++  L R+K LAEQAAT + + + R  I  E +    ++ 
Sbjct: 65  VRNANDAISMIQTADGALQIIDEKLIRMKELAEQAATGTYNSDQRLMIESEYQAMASEIT 124

Query: 123 NLAN-TKFENRHIFAG 137
            +AN T F   H+  G
Sbjct: 125 RIANATDFNGIHLLDG 140



 Score = 32.3 bits (72), Expect = 2e-05
 Identities = 29/115 (25%), Positives = 47/115 (40%), Gaps = 7/115 (6%)

Query: 404 ATAQPVGGGTTPNMFETVGRLVAFAETNNQDGVQKCLDELNGVSKTILTAAASIGGRENR 463
           ATA  +G G         G        + Q   Q  L  L+    +     A++G  +NR
Sbjct: 179 ATASQLGIGNA----SASGAAAGGYTISTQSAAQNALTALDQAIISKDKIRAALGALQNR 234

Query: 464 LDVVSGVLDNQKLDQTTRMSAVEDVDFSELMTRLAQEQLIYNSVLKSSSMIMQMN 518
           L+     L  Q  +  +  S + DVD +E MT   + Q++  S +   +M+ Q N
Sbjct: 235 LENTISNLTIQAENLQSSESRISDVDVAEEMTEFVRNQILTQSAV---AMLSQAN 286