Pairwise Alignments

Query, 610 a.a., peptidase, M23/M37 family (TIGR) from Desulfovibrio vulgaris Hildenborough JW710

Subject, 590 a.a., Peptidoglycan-binding LysM from Synechococcus elongatus PCC 7942

 Score =  117 bits (293), Expect = 1e-30
 Identities = 123/424 (29%), Positives = 174/424 (41%), Gaps = 61/424 (14%)

Query: 201 QPAPPVPSASSASSPASSANAADAGHAS-PVAAAGEASTPAVPLSPDQQAVLQRELAAYA 259
           +PAP   +A     P      A AG +  P  AA  +  P   + P     L R + A A
Sbjct: 194 EPAPIATAAPLVQDPVQQHLLALAGDSRLPSPAAERSVEPISSVPPQATPTLPRPVTAEA 253

Query: 260 RQVAAQRSAAPAAGTTDTEQVATGAAVAAAGPTAASGPESATTSPAATIPPAGHDAARAA 319
             V   RS APAA            A+    P     PE      A T+ P G   +R A
Sbjct: 254 -PVIQPRSLAPAA-----------VAIRPLSPATELSPEPQ----AYTVQP-GDSLSRIA 296

Query: 320 RSAGADFMTPPPVVRSPRNGRPDIPTTYRRNAGRRTDTA--SPAVTGPRVPSGQPVTRRP 377
              G D      +++  R   P++    +R        A  +P  T P +   Q      
Sbjct: 297 TRFGLDLQD---LLQVNRLSNPNLIFVGQRLTIPPAGQARLAPVATLPPLLRQQVTEDTS 353

Query: 378 GMTPAE-----GAQAVQNAASTFAPSAAAAQGVPAPSAPQPPTLPGVPAYTPGVPGMVTP 432
               A       A+    + S+  PS   +  + A ++   P+L    + TP +P     
Sbjct: 354 SRIAANLGSGLNAELTIESLSSPPPSNLKSLDITAQTSFSGPSLSSSRSLTPALP----- 408

Query: 433 PQGATQPVPPVASPPSSPAGAPVG------MPATRLASPVGGPAPAP-----LPG---RL 478
              +  P  P    P   A AP+G      + A+ L + V    P+      LPG   R 
Sbjct: 409 ---SATPFKPQQPEPDKVAVAPLGSENYEPLLASLLKTAVAPELPSLNSDELLPGGGDRF 465

Query: 479 A---WPVAGHISEGFGWRSDPVTGERAWHPGVDLAAAEGSPVRACWDGKVVFAG-EQGDY 534
           A   WP  G +S G+GWR   +      H G+D+A   G+P+ A   G VV AG   G Y
Sbjct: 466 AGYIWPARGILSSGYGWRWGRM------HRGIDIAGPVGTPILAAAPGVVVTAGWNSGGY 519

Query: 535 GNLVVVEHAGGWRSYYGHNAALSVRAGDVVASGSELAKAGATGRANGPHVHFEVR-LGEL 593
           GNLV ++H  G  + Y HN  + VR G+ V  G  +A+ G+TGR+ GPH+HFEV   G  
Sbjct: 520 GNLVEIQHPNGSLTLYAHNNRILVRPGERVQQGQIVAEMGSTGRSTGPHLHFEVHPRGNG 579

Query: 594 ALNP 597
           A+NP
Sbjct: 580 AVNP 583