Pairwise Alignments

Query, 398 a.a., conserved hypothetical protein (TIGR) from Desulfovibrio vulgaris Hildenborough JW710

Subject, 396 a.a., hypothetical SAM-dependent methyltransferase (NCBI ptt file) from Shewanella oneidensis MR-1

 Score =  230 bits (586), Expect = 6e-65
 Identities = 140/397 (35%), Positives = 213/397 (53%), Gaps = 13/397 (3%)

Query: 7   KLQLRRGEDRRLRVGHLWVFSNEV-DVARTPLKDFAPGEAACVVDAGGRPLGTAYVNPAS 65
           +++L+ G ++ L   H WVFSN + +V   P     PG+   VV   G  LG    +  S
Sbjct: 4   RIKLKPGREKSLERRHPWVFSNGIHNVKGKP----EPGQTVDVVAHDGHWLGRGAWSGES 59

Query: 66  LICARMVSRKPDAPLGPDLLRRRLTDALALRERLI---GVPFYRLCFGEGDFLPGLVVDR 122
            I  R+ +   +  +  +  +RR+  A A R+ LI   G+  YRL   E D LPG+ +D+
Sbjct: 60  QIQVRVWTFDREEEIDREFFKRRILRAQAGRDDLIREQGLTGYRLIAAESDGLPGITIDK 119

Query: 123 YGDVAAAQITTAGMEMHRDDIASVLQDMLSLSALLWRNDTASRELEGLPRVVETAFGAVP 182
           Y +V   Q+ + G ++ RD I  VL ++    A+  R+D  SR+ EGL   +    G +P
Sbjct: 120 YANVLVCQLLSMGADVWRDTIVDVLAELYPDCAIYERSDVDSRKKEGLASTMGLLHGTLP 179

Query: 183 ET-VTVEESGARFTAPLASGQKTGWFYDQRCNRIEAARFAQGARVLDAFCYLGSFGVMAA 241
           E  + +EE+G +    +  G KTG++ DQR NR  AARF +G  VL+ FCY G+FG+ AA
Sbjct: 180 EMPLIIEENGIKIAVDVTKGHKTGFYLDQRDNRAIAARFVKGKSVLNCFCYTGTFGLYAA 239

Query: 242 RAGAVAVTFLDASRPALDAALANAAANATCETDAVH---GDALDTLATLRDEGRRFEVVC 298
           +AGA ++  +D S  ALD A  N   N   + D VH    D    L   RDEG+ F+V+ 
Sbjct: 240 KAGAASIENVDVSSLALDTARLNMRVNGLSD-DNVHYNEADVFKLLRQYRDEGKTFDVIV 298

Query: 299 IDPPAFIKRRKDVKQGLAAYQRVNELAIDLVADGGVLVTCSCSQHLDRDALRRVLLHAAG 358
           +DPP F   +  +      Y+ +N +A+ L+  GGVL+T SCS  +  D  ++++  AA 
Sbjct: 299 LDPPKFADNKSQLNGACRGYKDINMIALQLLNPGGVLLTFSCSGLMPADLFQKIVADAAL 358

Query: 359 RRRTQAQIVFQGHQGPDHPVHPAMPETDYLKCFIARV 395
             + + Q + +  Q  DHP+  A PE  YLK  +ARV
Sbjct: 359 DAKREIQFIERLSQASDHPIGSAFPEGFYLKGLVARV 395