Pairwise Alignments

Query, 1513 a.a., sensor/response regulator (TIGR) from Desulfovibrio vulgaris Hildenborough JW710

Subject, 1185 a.a., Chemotaxis protein methyltransferase CheR (EC 2.1.1.80) from Xanthomonas campestris pv. campestris strain 8004

 Score =  382 bits (981), Expect = e-109
 Identities = 293/881 (33%), Positives = 430/881 (48%), Gaps = 50/881 (5%)

Query: 24  AVHLPLVVGIGASAGGLEALEGLFRHMPTTTGAAFVVIQHLSPDFPSFMDELLARQTV-- 81
           AVH  L + +G  A GL+A   L   + T    A + +  L  D  + +DE   R  +  
Sbjct: 23  AVHSALFI-LGVGATGLDATR-LAELLETIGNGANLAVMLLLRD-RALLDEARLRDLLGP 79

Query: 82  --MTIVVVQDGMCPAPDHIYLLPPGKEMEITLDGFILRDKSSYDNRPSMPINTFFASLAA 139
               +V   DG    P   YL PP   + +TL+   LR +          I++FF S+A 
Sbjct: 80  QSQQLVAPCDGDRLQPGRFYL-PPADTL-VTLEEGRLRLRPLDGESDHGLIDSFFVSMAH 137

Query: 140 WYGENAAGVVLSGTGTDGASGLEAISAAGGLVLVQLPESAAFDGMPKAAAAACRAAVLAT 199
               N  G+++     DG  G  AI   GGL LV   + A+  G+   +A++  A    +
Sbjct: 138 DQDGNVIGLIMGRVDGDGTLGTAAIKECGGLALVV--DDASLHGLDLHSASSPAAV---S 192

Query: 200 PDEMPDILAAFISGSPLPFEHPGLPADPAS--GGPAPDALQTIFTLLQRHGGLDFRDYKP 257
            D +P    A    + +   H    A P     G   + L  +  +L+   G DF  YK 
Sbjct: 193 DDILPLPRVAARISAHMQRHHGVAHAVPEGVRSGAESNQLSQVAGILRNTTGHDFHGYKR 252

Query: 258 ATIARRIMRRIRLEQHADIEGYARHLRDDPQAVQTLFRDLLIGVTTFFRDETAFDTLAAT 317
           AT  RR+ RR+++ Q   ++ Y   LR        LF DLLIGVT FFRD   F+ L   
Sbjct: 253 ATFLRRVQRRMQVVQVDTLDHYLDVLRSRQDEPLLLFNDLLIGVTQFFRDRREFEFLEQQ 312

Query: 318 VIPELFRKQGDRGEIRLWVAGCASGEEAYSLGMLLLEAAPQFDFTGRISIFATDVHRHSL 377
           VIP LF+ + +   +R+WV GC++GEEAYSL MLL E A   +   +I IFA+D+   +L
Sbjct: 313 VIPRLFQGKQNGDNLRVWVLGCSTGEEAYSLAMLLREHAETLESVPQIQIFASDIDGRAL 372

Query: 378 DRASAGVYTKDSLQALSPRRLQRFFIPEGDETYRVAPELRSLVLFTQHNILADPPFTRVD 437
             A  G Y+   +  ++P RL+R+F  EGD TY V+ ELR L +F+QH+I+ DPPF+R+D
Sbjct: 373 ATARVGRYSSSIVGEVAPERLKRWFTKEGD-TYAVSKELRELCVFSQHSIVKDPPFSRLD 431

Query: 438 LVSCRNLLIYFGVDAQERAIARLHMALRPGGVLFMGASETTGRLHPIFEPLDPRLRIFTK 497
           LVSCRNLLIY   + Q R I   H AL+PGG LF+G +E   R   +F P++   R+F K
Sbjct: 432 LVSCRNLLIYLDAELQNRVIPLFHFALKPGGYLFLGNAENVSRHAKLFAPVERSFRVFQK 491

Query: 498 RPDTLGMTATHLVHPAVIDAHRLATSSP----QPSERQLLRDYDALLQRFAPDGMLVDDR 553
                  T  H   P++  A      +P    + S + L+R  + +  R+AP   ++D+ 
Sbjct: 492 ID---AETRLHSTFPSLPPARPGKVPAPVQRLRSSSQALVRAGERIADRYAPAYAVLDEH 548

Query: 554 FAVLHFFGNGASYLTQHTGRTDRPITDMVEGDLRLALSSALQRASTTGETARFKSIRVPG 613
           F V+HF      ++   +G     + ++V  DLRL L  AL RA +     + K I++ G
Sbjct: 549 FDVMHFSSQAGRFVRPGSGPPSLNLLNLVHRDLRLELRGALSRAESENAPVQVKGIQMRG 608

Query: 614 NGGDRLVDVEVMPIGNKPSDGKHYHVALQSSHPVLIRPLVEPAATGHGTGLLASRVAELE 673
           +G    VD+ V P  +     + Y V  Q    V  R L EPAA    +      V  LE
Sbjct: 609 DGVTWAVDIFVEPTSDSEVP-RGYVVLFQE---VESRELAEPAARAPASD--NEHVQVLE 662

Query: 674 AELAETRSSLRDSIEQVHVTNEEL-------QATNEELLSANEELQATNEELHSINEELY 726
            EL  TR  L+  IE++  TNEEL       Q+ NEEL SANEEL+ + EEL S+NEE+ 
Sbjct: 663 NELRITRERLQAMIEELESTNEELKSSNEEYQSLNEELQSANEELETSKEELQSVNEEVT 722

Query: 727 TVNAEFERKNDQLRILGEDYAQLFDTIPIAIASLDESLRVRRFNAGMSAIFHLQPHDVGR 786
           TVN E   +  +L     D   L ++  IA   LD  LRV  F   ++ I  L   D+ R
Sbjct: 723 TVNGELAHRVQELAHANSDLKNLLESTQIATVFLDNELRVTNFTPAVTDIVPLVESDIHR 782

Query: 787 PLQQIASCLA------EPDNLFKSLALGLSEGGTHDSEARLTDGRWCQQRIHAVRDETGA 840
           P+  I   +A      +   + ++LA+   E     + AR         R+   R     
Sbjct: 783 PISHIKMRVAYVELQDDVRRVIRTLAVLDREVENPTTRARY------MVRVLPYRTVDNF 836

Query: 841 TEHMLLTFMDITHVKHAE-AMRQEARSLDEVSRNVPGVVFK 880
               ++TFMD+T +  AE A+R   + L  +   +P +V++
Sbjct: 837 IGGAVITFMDVTPLTRAEDALRGSEQRLRTLMEGIPQLVWR 877



 Score = 52.0 bits (123), Expect = 4e-10
 Identities = 35/134 (26%), Positives = 59/134 (44%), Gaps = 4/134 (2%)

Query: 969  GGTEWYGVAVDATERRYDATRMHNAADRYLRILDHAPMLIWRSDTTGACDWFNTTWLDFT 1028
            GG     + V    R  DA R   +  R   +++  P L+WRS   G   W +  W  +T
Sbjct: 838  GGAVITFMDVTPLTRAEDALR--GSEQRLRTLMEGIPQLVWRSLDGGRWTWSSPQWSAYT 895

Query: 1029 GRTMEQEYGYGWAGGVHPDDYDRCVSIYQKAFALQQAFEMNYRL-KRHDGQFRWLVDCGK 1087
            G+T ++    GW   VHPDD +  +  ++   A     ++ +RL    +  +RW      
Sbjct: 896  GQTDQESRELGWLEAVHPDDRELTMDAWRDCPA-SGGLDVEHRLYNAAERGYRWFHTRSA 954

Query: 1088 PLPDLDGTFSGFIG 1101
            P+ + DG    ++G
Sbjct: 955  PVRNDDGHVLEWLG 968