Pairwise Alignments

Query, 372 a.a., GGDEF domain protein (TIGR) from Desulfovibrio vulgaris Hildenborough JW710

Subject, 565 a.a., sensor histidine kinase from Xanthomonas campestris pv. campestris strain 8004

 Score =  132 bits (331), Expect = 3e-35
 Identities = 79/196 (40%), Positives = 107/196 (54%), Gaps = 4/196 (2%)

Query: 168 ISLVSVAEAARRHSERRL--LALTHQLAFCARSDPLTGLANRRSLCERFEQERQRSLRNN 225
           ++ ++VAEAA       L  L L   L   +  DPLTGL NRR L E    E  R  R  
Sbjct: 367 LASLTVAEAAAEQLSLALHNLRLRETLRQQSIRDPLTGLFNRRYLEEALNHELSRCTRRV 426

Query: 226 TPLSLILCDIDHFKTINDTHGHECGDYVLRKLADMLRTNMRAQDTVCRWGGEEFLLLLPD 285
            PLS+++ D+DHFK  ND HGH  GD VL  + ++L    R +D  CR+GGEE  ++LP+
Sbjct: 427 QPLSVLMLDVDHFKQFNDLHGHSGGDRVLAAIGELLLAQTRGEDICCRYGGEELTIILPE 486

Query: 286 TDEKGATRLAEKLRTLTESYPFSYHGIPI-RVTLCFGVHQC-SREGHTDYHIRKADRKLY 343
            D   A+ +AEKLR   +       G+ + ++T  FGV       G+    +RKAD  LY
Sbjct: 487 VDLATASAMAEKLRAGIDGLQVMADGVSLPKITASFGVATFPGHAGNAAQLLRKADEALY 546

Query: 344 MAKEQGRNRVVSGDIP 359
            AK+ GRN+VVS   P
Sbjct: 547 RAKQAGRNQVVSAVTP 562