Pairwise Alignments

Query, 372 a.a., GGDEF domain protein (TIGR) from Desulfovibrio vulgaris Hildenborough JW710

Subject, 624 a.a., GGDEF domain-containing protein (RefSeq) from Shewanella amazonensis SB2B

 Score =  126 bits (316), Expect = 2e-33
 Identities = 73/185 (39%), Positives = 102/185 (55%), Gaps = 5/185 (2%)

Query: 183 RRLLALTHQLAFCARSDPLTGLANRRSLCERFEQERQRSLRNNTPLSLILCDIDHFKTIN 242
           R L  +  +L      D LTG+ NR +  +R + E + S R  TP++L++ DIDHFK IN
Sbjct: 440 RELNEVNQKLTEQTTIDSLTGVKNRAAFNKRLQAEGRISRRQQTPMALLMLDIDHFKNIN 499

Query: 243 DTHGHECGDYVLRKLADMLRTNM-RAQDTVCRWGGEEFLLLLPDTDEKGATRLAEKLRTL 301
           D +GH  GDY L+ +AD L   + R  D V R+GGEEF ++LP TD +GA  +AE +R  
Sbjct: 500 DKYGHLAGDYTLKAIADTLSAQLRRPTDLVSRFGGEEFAIILPSTDAEGAVAVAEHIREA 559

Query: 302 TESYPFSYHGIPIRVTLCFGVHQ--CSREGHTDYHIRKADRKLYMAKEQGRNRVVSGDIP 359
            E     +    I +T+  GV       + H    + +AD+ LY AK  GRNRV  G   
Sbjct: 560 VEELTIKWEQFMIPLTVSIGVSSNIIESDEHPLQLLEQADKALYQAKHDGRNRV--GLFQ 617

Query: 360 DILLP 364
           DI +P
Sbjct: 618 DIPVP 622