Pairwise Alignments

Query, 372 a.a., GGDEF domain protein (TIGR) from Desulfovibrio vulgaris Hildenborough JW710

Subject, 496 a.a., diguanylate cyclase with PAS/PAC sensor (RefSeq) from Shewanella loihica PV-4

 Score =  130 bits (327), Expect = 8e-35
 Identities = 77/193 (39%), Positives = 112/193 (58%), Gaps = 7/193 (3%)

Query: 166 ASISLVSVAEAARRHSERRLLALTHQLAFC--ARSDPLTGLANRRSLCERFEQERQRSLR 223
           ASIS+ +      +HS   +  L+ ++ +   A +DPLT +ANRR++  +      RS R
Sbjct: 305 ASISIATYGVGDEKHSIVVIKDLSDEMQYKSQANTDPLTKVANRRAINRQLAAAISRSNR 364

Query: 224 NNTPLSLILCDIDHFKTINDTHGHECGDYVLRKLADMLRTNMRAQDTVCRWGGEEFLLLL 283
             TPL++ + DIDHFK +ND HGH  GD VL+++A +    +R  D V RWGGEEF+++L
Sbjct: 365 QQTPLAVCIFDIDHFKAVNDKHGHLVGDDVLQRVAKIFSDAIRKTDFVGRWGGEEFVIIL 424

Query: 284 PDTDEKGATRLAEKLRTLTESYPFSYHGI--PIRVTLCFGVHQCSREGHTDYHIRKADRK 341
            DTD++GA   A+KLR   +       GI  P+ +TL  GV    ++   D     AD+ 
Sbjct: 425 EDTDKEGAKHFADKLR---QEVKRRSQGIDFPVAITLSAGVSVYCQDDKQDCLFNHADQA 481

Query: 342 LYMAKEQGRNRVV 354
           LY AKE GR+ VV
Sbjct: 482 LYRAKESGRDCVV 494