Pairwise Alignments

Query, 372 a.a., GGDEF domain protein (TIGR) from Desulfovibrio vulgaris Hildenborough JW710

Subject, 631 a.a., diguanylate cyclase with hemerythrin-like metal-binding domain (RefSeq) from Desulfovibrio vulgaris Miyazaki F

 Score =  130 bits (326), Expect = 1e-34
 Identities = 102/277 (36%), Positives = 142/277 (51%), Gaps = 13/277 (4%)

Query: 104 GMGHLWVFSLPPLLLFTFGLRRGGMLVALLVFGIICILYGPEE-LSPFEYGDSFAPRYLL 162
           G G    F +P L+L  +  R  G+++AL V  ++ + YG      PF+   +    +LL
Sbjct: 217 GYGGCIYFIMPLLVLLAYNARLHGLMLAL-VPSMMAVAYGATMGFGPFQMPTTGEAAFLL 275

Query: 163 ALTASISLVSVAEAARRHSERRLLALTHQLAF--CARSDPLTGLANRRSLCERFEQERQR 220
           A T   S   V      H+ + L A +++  +   A  DPLTGL NR  L    E E +R
Sbjct: 276 A-TFLCSTTIVTLGVALHNRQLLNADSNREMWEQKAMRDPLTGLFNRSRLDCALETELRR 334

Query: 221 SLRNNTPLSLILCDIDHFKTINDTHGHECGDYVLRKLADMLRTNM-RAQDTVCRWGGEEF 279
           + R+   LSL++ D+D+FK+ ND HGH  GD  LR +A  LRT + RA D V R+GGEEF
Sbjct: 335 AQRSEDVLSLLMVDVDNFKSYNDIHGHVAGDTCLRAVAHTLRTVVHRAPDMVARYGGEEF 394

Query: 280 LLLLPDTDEKGATRLAEKLRTLTESYPFSYHG-IPI-RVTLCFGVH--QCSREGHTDYHI 335
             +LP T E GA ++AE++R         + G  P   VT+  GV   +  R    D  I
Sbjct: 395 ACVLPGTAEAGAAQMAERIRCAVAELCIVHPGNTPAGHVTVSVGVTTVRGGRNATPDQAI 454

Query: 336 RKADRKLYMAKEQGRNRVVSGDIPDILLPPGYIEEAD 372
             ADR LY AK +GRN V +      +LPP     AD
Sbjct: 455 DMADRALYRAKSKGRNTVATA---QDILPPQACPHAD 488