Pairwise Alignments

Query, 372 a.a., GGDEF domain protein (TIGR) from Desulfovibrio vulgaris Hildenborough JW710

Subject, 474 a.a., diguanylate cyclase with extracellular sensor (RefSeq) from Desulfovibrio vulgaris Miyazaki F

 Score =  125 bits (314), Expect = 2e-33
 Identities = 74/171 (43%), Positives = 97/171 (56%), Gaps = 3/171 (1%)

Query: 183 RRLLALTHQLAFCARSDPLTGLANRRSLCERFEQERQRSLRNNTPLSLILCDIDHFKTIN 242
           RRL  +   L   AR+DPLT L NR  L E F +E +R+ R   P S+++ DIDHFK +N
Sbjct: 304 RRLKRMNAVLERLARTDPLTDLPNRSRLNELFRREVERAQRYRRPFSIVILDIDHFKRVN 363

Query: 243 DTHGHECGDYVLRKLADMLRTNMRAQDTVCRWGGEEFLLLLPDTDEKGATRLAEKLRTLT 302
           D  GH  GD  L+  A ++R ++R  DTV RWGGEEFL+L P+T  + A +LAE+LR   
Sbjct: 364 DELGHLAGDRTLQVFAGVVRDSVRGTDTVGRWGGEEFLVLCPETTAEEAVQLAERLRGSL 423

Query: 303 ESYPFSYHGIPIRVTLCFGVHQCSREGHTDYHIRKADRKLYMAKEQGRNRV 353
            +  F    I    TL  GV         D  + +AD  LY AK  GR+RV
Sbjct: 424 RATQFEGGRIH---TLSAGVAAFREGDSVDTLLHRADTALYRAKNGGRDRV 471