Pairwise Alignments

Query, 372 a.a., GGDEF domain protein (TIGR) from Desulfovibrio vulgaris Hildenborough JW710

Subject, 381 a.a., diguanylate cyclase (RefSeq) from Desulfovibrio vulgaris Miyazaki F

 Score =  380 bits (975), Expect = e-110
 Identities = 190/365 (52%), Positives = 251/365 (68%), Gaps = 5/365 (1%)

Query: 5   IDRVFSNGLSHAPQPEAIHHVGVANMFNAVTMVFCLSLAFFDWMQGYGGMALLLCGIAAL 64
           ++ + +NGL     PE     GVAN+F  VT +F   +   D+MQ  G +AL L  + AL
Sbjct: 11  MNALLANGLQDDADPETARVTGVANLFYGVTALFSAVMGVLDFMQDQGTLALFLLAMLAL 70

Query: 65  ALFSMLHLGRTGKRSNINLLLALALIGVDWWLMATGGVAGMGHLWVFSLPPLLLFTFGLR 124
           ALF +  +GRTG+    +  L LAL  +  ++++ GGV G G +W+F  PP+++ TFGL 
Sbjct: 71  ALFGLFWVGRTGRHVLPSTALVLALFTLSLYMVSHGGVEGSGFVWLFIFPPVVMLTFGLS 130

Query: 125 RGGMLVALLVFGIICILYGPEELSPFEYGD---SFAPRYLLALTASISLVSVAEAARRHS 181
            G +L+  L+ G+  IL+ P +  PF Y D   +F  RY+LAL        +AE  RRH+
Sbjct: 131 IGILLMGALLLGVGAILFLPGD--PFLYADYSQAFRIRYMLALLCCGIFAGLAEYTRRHT 188

Query: 182 ERRLLALTHQLAFCARSDPLTGLANRRSLCERFEQERQRSLRNNTPLSLILCDIDHFKTI 241
           +R L+ LT QLA  AR+D LTGLANRR+LCER E E+ R+ R   PLS+ +CDIDHFK++
Sbjct: 189 QRLLILLTQQLAESARTDELTGLANRRALCERLEYEQVRARRTGRPLSIAICDIDHFKSV 248

Query: 242 NDTHGHECGDYVLRKLADMLRTNMRAQDTVCRWGGEEFLLLLPDTDEKGATRLAEKLRTL 301
           ND +GH+CGD VL+ +A +L  N+R QDT+CRWGGEEFLLLLP+TDE GA RLAEKLR+L
Sbjct: 249 NDCYGHQCGDLVLQSVAGLLHDNLRHQDTICRWGGEEFLLLLPETDEAGAARLAEKLRSL 308

Query: 302 TESYPFSYHGIPIRVTLCFGVHQCSREGHTDYHIRKADRKLYMAKEQGRNRVVSGDIPDI 361
            E+  +SYHGIP+ VTL FGVH C  EG  DYHIRKAD+KLY+AKEQGRNRV +G++PDI
Sbjct: 309 VEAMEYSYHGIPVSVTLSFGVHTCGPEGDIDYHIRKADQKLYLAKEQGRNRVFAGEVPDI 368

Query: 362 LLPPG 366
            LP G
Sbjct: 369 FLPEG 373