Pairwise Alignments

Query, 372 a.a., GGDEF domain protein (TIGR) from Desulfovibrio vulgaris Hildenborough JW710

Subject, 625 a.a., diguanylate cyclase (RefSeq) from Shewanella sp. ANA-3

 Score =  119 bits (298), Expect = 2e-31
 Identities = 67/174 (38%), Positives = 102/174 (58%), Gaps = 3/174 (1%)

Query: 183 RRLLALTHQLAFCARSDPLTGLANRRSLCERFEQERQRSLRNNTPLSLILCDIDHFKTIN 242
           R L  +  +L   +  D LTG+ NR +  +R   E + S R  TP++L++ DID FK+IN
Sbjct: 441 RELHEVNQKLTEQSTIDSLTGVKNRSAFDKRLLAESRISRRQETPIALLMLDIDRFKSIN 500

Query: 243 DTHGHECGDYVLRKLADMLRTNM-RAQDTVCRWGGEEFLLLLPDTDEKGATRLAEKLRTL 301
           D  GH  GD  L+ +A  L+ ++ R  D V R+GGEEF ++LP+T  +GA ++AE +R  
Sbjct: 501 DQFGHLAGDQALKVIATTLQQHLKRPTDLVSRFGGEEFAIILPNTTAEGAIQVAESIRDA 560

Query: 302 TESYPFSYHGIPIRVTLCFGVHQ--CSREGHTDYHIRKADRKLYMAKEQGRNRV 353
             S   ++ G PI +T+  GV     S + H+   + +AD+ LY AK  GRN+V
Sbjct: 561 VTSIGLAWEGKPIPLTVSIGVSADVISNDQHSTELLEQADKALYQAKNSGRNQV 614