Pairwise Alignments

Query, 715 a.a., response regulator/sensory box/GGDEF domain/EAL domain protein (TIGR) from Desulfovibrio vulgaris Hildenborough JW710

Subject, 680 a.a., GGDEF domain-containing protein (RefSeq) from Shewanella amazonensis SB2B

 Score =  342 bits (877), Expect = 4e-98
 Identities = 188/445 (42%), Positives = 282/445 (63%), Gaps = 14/445 (3%)

Query: 271 GIVGTFLD--ITELKRKEAQIVHQATHDELTGLLNRFGMRQHVDRLIVGGQM---SFALL 325
           G+V T L+  + +  + ++++   AT D LTGL NR  + + +   I   ++   SF LL
Sbjct: 225 GLVSTKLNQILLQFGQTQSKLRKMATRDPLTGLPNRTLLLETIAVTIQRARVHKRSFTLL 284

Query: 326 VIDLDDFKTINDSLGHALGDRLLHKAAERIVELVGSQGIVGRPGGDEYVVLLYNVD-AEA 384
            IDLD FK +NDSLGHALGD+ L + A  +  +VG +G V R GGDE+V+L   +  A+ 
Sbjct: 285 FIDLDRFKNVNDSLGHALGDQFLARIARLLERVVGDKGTVARLGGDEFVILADEIHCADM 344

Query: 385 AHAMARRILDIFTDSLSVSGHEVYISLSIGIAVYPEDGDDAANLFKCCDIAMYRAKEEGG 444
           A     ++L    + + +  H ++ + S+GI++YPEDG+ A +L +  DIAMY AK  G 
Sbjct: 345 AADFVDKLLVQLNNPIQLGDHSIHPAASVGISLYPEDGNSAEDLIRHADIAMYSAKASGS 404

Query: 445 ARAQRYLAAMQDVITSRLALEKNLRKALERGEFVLHYQPKVDIRTGAVTGMEALVRWVRD 504
            +   +   M +    RL  E +L  AL+  EFVLH+QPK+D+ TG V G EAL+RW + 
Sbjct: 405 NQWAFFKQQMTERAAVRLRTEASLHDALKNDEFVLHFQPKLDLTTGKVMGCEALIRW-QK 463

Query: 505 DGTIVPPQDFIPVAEKTGLIVALGEFVLREACRQMHAWQKRFG-RLKMAVNISARQFQPG 563
           DG ++ P  FIPVAE+TG+IV +G +VL ++C+ +  WQK++   + +AVN++++QF   
Sbjct: 464 DGRLISPMSFIPVAEETGIIVPIGRWVLEQSCKTLRHWQKQYNFAIPIAVNVASQQFADA 523

Query: 564 --LPDTVASALADAGLDPGLLELEITETTMMRDLALTVSVLERLTTGGIAVAIDDFGTGH 621
             +PD    AL    + P LLE+EITET++M D+   +S LE+L   G  +A+DDFGTG+
Sbjct: 524 SLVPDIKQMALR-YQISPDLLEIEITETSLMSDVETAISKLEQLKNAGFGIAVDDFGTGY 582

Query: 622 SSLYYLKTFPISSIKIDRSFVRDIPNDETDATIVTTVVSMGRNLGIGIVAEGVETEAQLD 681
           SSL YL+  PI+++KIDR FV D+PN   D+ I +T++ +G+ L + IVAEG+E E QL 
Sbjct: 583 SSLSYLRHLPITTMKIDRCFVTDLPN---DSAIASTILMLGKQLDLRIVAEGIENEQQLQ 639

Query: 682 FLRSLECPEVQGYYFSKPLPPHAFE 706
           +L++  C   QG+YFS PLP   FE
Sbjct: 640 WLKTAGCGIGQGFYFSPPLPMEEFE 664