Pairwise Alignments

Query, 715 a.a., response regulator/sensory box/GGDEF domain/EAL domain protein (TIGR) from Desulfovibrio vulgaris Hildenborough JW710

Subject, 879 a.a., PAS domain S-box/diguanylate cyclase (GGDEF) domain-containing protein from Dechlorosoma suillum PS

 Score =  411 bits (1057), Expect = e-119
 Identities = 266/714 (37%), Positives = 392/714 (54%), Gaps = 25/714 (3%)

Query: 13  DDDADRMNLVAYLEDSGYIVLEAANGRAGLDVFRAEH-PDLILVDLRMPVMGGMEVVAHM 71
           DD  + + ++  L +  Y V  A +G+  L V  +   PDLIL+D+ MP M G E +A +
Sbjct: 23  DDTKENLTVIGELLNPHYNVRIANSGQRALKVANSTPVPDLILLDIMMPEMDGYETLAEL 82

Query: 72  REEAPG--VPVIVVSGAGILEEAVEALRRGAWDYVTKPVLDMRVLEHAVMKALERARLLD 129
           R       +PVI V+     E+    L  GA DY+ KP+    +L   +   L+     D
Sbjct: 83  RANPATRHIPVIFVTALDADEDEERGLALGAVDYIAKPIRPA-ILLGRIRTQLDLKLAQD 141

Query: 130 ERQRYQERLEFEVEARTRELRVSNEQLRSTQSELEDKSLFLETLIESLPNPLFYKTLDGV 189
           + +R    LE EV+ R  E     EQ +  ++ L   +   + ++ S    +F   ++G 
Sbjct: 142 QLRRQNASLEAEVQRRVAENLAIQEQGQRNEARL---NRMRQLILSSASEGIFGVDVEGR 198

Query: 190 YIGCNKAFSQLLGIPREKMVGRSARDLLPDHAYAQIIAGDCPSGSDAGEHSCVFDILGAD 249
               N A + LLG   E+++G+ +  +L  H++   I G   +  D   H C+   +   
Sbjct: 199 INFINPAATALLGYTEEELLGQDSHRML-HHSH---IDGSHYAVEDCPMHLCLHSGITIR 254

Query: 250 GHIHTLALYKSTYSDSQ---------GQVSGIVGTFLDITELKRKEAQIVHQATHDELTG 300
               TL     T    +         G++ G V T  DI + KR   Q+   + +DELT 
Sbjct: 255 DRESTLWHRDGTPLPLECSHTPIVEDGRIIGAVTTLRDIRDRKRYLEQLERHSNYDELTD 314

Query: 301 LLNR---FGMRQHVDRLIVGGQMSFALLVIDLDDFKTINDSLGHALGDRLLHKAAERIVE 357
           L NR   +    H   +     M+ A+L ++LD FK+IND+LG A GD++L + A+R+  
Sbjct: 315 LPNRNLLYDRLNHNIEVCRRSGMNIAVLTLNLDRFKSINDTLGRAAGDQVLREVAQRLGR 374

Query: 358 LVGSQGIVGRPGGDEYVVLLYNVDAEAAHAMARRILDIFTDSLSVSGHEVYISLSIGIAV 417
            V     + R  GDE+V+++    AE + A A+ IL    +   V+  E ++S SIGIA 
Sbjct: 375 QVRKMDTLARLEGDEFVLVVEVATAEQSSAFAQPILKALANPFHVAEREFFLSGSIGIAT 434

Query: 418 YPEDGDDAANLFKCCDIAMYRAKEEGGARAQRYLAAMQDVITSRLALEKNLRKALERGEF 477
           +P+DGD+   L +  D AMY+AK +GG R Q Y A M      RL LE  LR+A+++GE 
Sbjct: 435 FPKDGDNGEELLRNADAAMYKAKTKGGNRFQFYTAEMNQRSLERLDLENGLRRAIDQGEL 494

Query: 478 VLHYQPKVDIRTGAVTGMEALVRWVRDDGTIVPPQDFIPVAEKTGLIVALGEFVLREACR 537
           V++YQP+V++R GA+ G EALVRW   +  +V P  FI +AE+TGLIV LGE+VLR AC 
Sbjct: 495 VVYYQPQVNLRNGAIIGAEALVRWQDPEKGLVMPGSFIALAEETGLIVPLGEWVLRTACS 554

Query: 538 QMHAWQKR-FGRLKMAVNISARQF-QPGLPDTVASALADAGLDPGLLELEITETTMMRDL 595
           Q  AWQ     ++ +AVN+SARQF    + +  A  L D GL P  LELE+TE+ +M D 
Sbjct: 555 QNKAWQDAGLPKIPVAVNLSARQFAAQDVVELAARILHDTGLAPNYLELELTESAVMADA 614

Query: 596 ALTVSVLERLTTGGIAVAIDDFGTGHSSLYYLKTFPISSIKIDRSFVRDIPNDETDATIV 655
              +   E+L    IA++IDDFGTG SSL YLK F I  +KID++FVRDI +D   A+I 
Sbjct: 615 EAFIRATEKLKGLSIALSIDDFGTGFSSLSYLKRFAIDRLKIDQTFVRDITHDPDSASIA 674

Query: 656 TTVVSMGRNLGIGIVAEGVETEAQLDFLRSLECPEVQGYYFSKPLPPHAFEAWM 709
             ++S+  +L +  +AEGVETEAQL+FLR+  C E+QGY+FS  LP   FEA +
Sbjct: 675 LAIISLAHSLKLLAIAEGVETEAQLNFLRARNCDEMQGYFFSPALPADEFEAML 728



 Score = 60.1 bits (144), Expect = 5e-13
 Identities = 38/116 (32%), Positives = 60/116 (51%), Gaps = 2/116 (1%)

Query: 2   SDSPARILCIDDDDADRMNLVAYL-EDSGYIVLEAANGRAGLDVFRAEHPDLILVDLRMP 60
           S  P R L + DD+   ++ +  L    GY++L A +G+ GLD+       +I+ D RMP
Sbjct: 740 SKVPGRTLLLVDDEPGILSALKRLFRREGYVILTANSGKEGLDILAGHDVGVIISDARMP 799

Query: 61  VMGGMEVVAHMREEAPGVPVIVVSGAGILEEAVEALRRG-AWDYVTKPVLDMRVLE 115
            M G E +  +R   P    I++SG   L+    A+ RG  + ++TKP  D  +LE
Sbjct: 800 EMDGAEFLGKVRAMYPDTMRIILSGYTDLKAVTSAVNRGELFKFLTKPWDDGELLE 855