Pairwise Alignments

Query, 715 a.a., response regulator/sensory box/GGDEF domain/EAL domain protein (TIGR) from Desulfovibrio vulgaris Hildenborough JW710

Subject, 833 a.a., PAS domain S-box/diguanylate cyclase (GGDEF) domain-containing protein from Dechlorosoma suillum PS

 Score =  366 bits (939), Expect = e-105
 Identities = 221/530 (41%), Positives = 314/530 (59%), Gaps = 16/530 (3%)

Query: 191 IGCNKAFSQLLGIPREKMVGRSARDLLPD-----HAYAQIIAGDCPSGSDAGEHSCVFDI 245
           +  NKAF  + G   E  V  S   LL       +  A+I      SG+  GE   ++D 
Sbjct: 306 LSVNKAFCDITGFS-EAEVRMSLPALLQPTRDDPNLAAEIQVALASSGAWQGE---LWD- 360

Query: 246 LGADGHIHTLALYKSTYSDSQGQVSGIVGTFLDITELKRKEAQIVHQATHDELTGLLNRF 305
              +G  + + +  S+  +++G +S     F DI+E K  E QI   A +D LTGL NR 
Sbjct: 361 RRKNGDTYPVWVSISSVKNTRGILSHYFLVFSDISERKEAERQIYRLAYYDALTGLPNRS 420

Query: 306 GMRQHVDRLIVGGQMSF---ALLVIDLDDFKTINDSLGHALGDRLLHKAAERIVELVGSQ 362
            +   +++ ++  Q +    A+L +DLD FKTINDS GHA  D LL + A R+ E + ++
Sbjct: 421 LLFSLLEQALIEAQRNQTHGAVLFVDLDRFKTINDSFGHAPADALLKEVARRLQETLRAE 480

Query: 363 GIVGRPGGDEYVVLLYNVDA-EAAHAMARRILDIFTDSLSVSGHEVYISLSIGIAVYPED 421
            +V R GGDE++V L+++   E A  + ++ILD   +   +  HEV ++ SIGIAV+P+D
Sbjct: 481 DVVARLGGDEFIVALFDITKREHAALVGQKILDALAEPFQIVHHEVLLTASIGIAVFPDD 540

Query: 422 GDDAANLFKCCDIAMYRAKEEGGARAQRYLAAMQDVITSRLALEKNLRKALERGEFVLHY 481
           G DA  L +  D AMYR K+  G     Y   M      RL LE  LRKA+ER EF L+Y
Sbjct: 541 GRDAETLLRNADTAMYRVKQTSGGPLF-YSQEMNLRSLERLKLEGALRKAVERQEFRLYY 599

Query: 482 QPKVDIRTGAVTGMEALVRWVRDDGTIVPPQDFIPVAEKTGLIVALGEFVLREACRQMHA 541
           QP+V++ TG + G EAL+RW   +  ++PP  FIP+AE+TGLIV++G +VL  ACRQ   
Sbjct: 600 QPQVELATGRIVGAEALIRWHHPEQGMIPPTAFIPLAEETGLIVSIGAWVLDAACRQGRL 659

Query: 542 WQKR-FGRLKMAVNISARQFQPGLPDTVASALADAGLDPGLLELEITETTMMRDLALTVS 600
           W++  +  L +AVN+S RQF+PGL   V   L         LELEITE  +M +    + 
Sbjct: 660 WREAGYEDLTIAVNLSPRQFRPGLSQLVNETLERHAFPGENLELEITEGMLMHNSEAVIQ 719

Query: 601 VLERLTTGGIAVAIDDFGTGHSSLYYLKTFPISSIKIDRSFVRDIPNDETDATIVTTVVS 660
           +LE     G+ +A+DDFGTG+SSL YLK FPI ++KIDRSFV  IP+D  D+ I   ++S
Sbjct: 720 MLEDFHQAGVRLALDDFGTGYSSLAYLKKFPIDNLKIDRSFVSGIPHDGDDSAIAKAIIS 779

Query: 661 MGRNLGIGIVAEGVETEAQLDFLRSLECPEVQGYYFSKPLPPHAFEAWME 710
           M +NL + ++AEGVETE QLDFLR+  C E+QGY FS P+P   F+  +E
Sbjct: 780 MAKNLRLLVIAEGVETEEQLDFLRAAGCDEIQGYLFSPPVPVEDFQLLLE 829



 Score = 34.3 bits (77), Expect = 3e-05
 Identities = 33/142 (23%), Positives = 61/142 (42%), Gaps = 8/142 (5%)

Query: 154 EQLRSTQSELEDKSLFLETLIESLPNPLFYKTLDGVYIGCNKAFSQLLGIPREKMVGRSA 213
           E L   ++++E++S  L+ + +S+        L G  +G NK   +L G    + VGR  
Sbjct: 148 EDLARMEAKVEEQSQILDHIHDSV----ITMDLSGYIMGWNKGAERLFGYTAAEAVGRHI 203

Query: 214 RDLLPDHAYAQIIAGD---CPSGSDAGEHSCVFDILGADGHIHTLALYKSTYSDSQGQVS 270
             L  D     +   D     +  D G            G +   ++  S   +  G+ +
Sbjct: 204 LFLYADDGSETLEEEDDLFYNAFLDHGRREFEVRRRKKSGEVFWASVSLSLSRNEAGEPA 263

Query: 271 GIVGTFLDIT-ELKRKEAQIVH 291
           G++G  +DIT +L+R+E   +H
Sbjct: 264 GLIGYLVDITNQLEREEKLRLH 285