Pairwise Alignments

Query, 715 a.a., response regulator/sensory box/GGDEF domain/EAL domain protein (TIGR) from Desulfovibrio vulgaris Hildenborough JW710

Subject, 889 a.a., PAS domain S-box/diguanylate cyclase (GGDEF) domain-containing protein from Dechlorosoma suillum PS

 Score =  383 bits (983), Expect = e-110
 Identities = 227/547 (41%), Positives = 325/547 (59%), Gaps = 12/547 (2%)

Query: 164 EDKSLFLETLIESLPNPLFYKTLDGVYIGCNKAFSQLLGIPREKMVGRSARDLLPDHAYA 223
           ++ S  +  L++S+P+  + K     +   N+A++++ G P E++VG++   + P+ A A
Sbjct: 327 DESSSRIRALLDSIPDLAWIKDNAFRFHAVNEAYARMCGKPAEEIVGKTVFQVWPE-ALA 385

Query: 224 QIIAGDCPSGSDAGEHSCVFDIL--GADGHIHTLALYKSTYSDSQGQVSGIVGTFLDITE 281
           +       +   +G+    F++L    +G   TL   +    + +G+V G+ G   DITE
Sbjct: 386 RTFQNHDEAVLASGKPGH-FEVLVTNGEGQPRTLDYIRVPVHNEEGEVVGMAGIARDITE 444

Query: 282 LKRKEAQIVHQATHDELTGLLNRFGMRQHVDRLI---VGGQMSFALLVIDLDDFKTINDS 338
            K  EA+I H A HD LT L NR  +   +   I   VG Q   ALL++DLD FK INDS
Sbjct: 445 RKEAEARIRHLAEHDALTDLPNRSLLSSRMADAINRSVGSQAPMALLLLDLDHFKNINDS 504

Query: 339 LGHALGDRLLHKAAERIVELVGSQGIVGRPGGDEYVVLLYNVD-AEAAHAMARRILDIFT 397
           LGH +GD+LL  AAER+   + +   + R GGDE+ +LL     A     +A+R+L+   
Sbjct: 505 LGHEVGDKLLQLAAERLRHTLDAADTLSRSGGDEFAILLTECSGAPMIGRIAQRLLETMA 564

Query: 398 DSLSVSGHEVYISLSIGIAVYPEDGDDAANLFKCCDIAMYRAKEEGGARAQRYLAAMQDV 457
              +V GHE+ +S S+GI++YP DG D   L K  D AMY AK  G    Q +   M   
Sbjct: 565 QPFNVDGHELVLSASVGISMYPHDGTDLGALLKNADAAMYSAKAAGRNTYQFFTPEMNAR 624

Query: 458 ITSRLALEKNLRKALERGEFVLHYQPKVDIRTGAVTGMEALVRWVRDDGTIVPPQDFIPV 517
           +  RL+LE +LRKAL R E +L+YQP+  +  G   G EAL+RW   +  +VPP  FIP+
Sbjct: 625 VFERLSLENSLRKALPRQELMLYYQPQYRVGGGDPIGFEALLRWRHPELGLVPPARFIPI 684

Query: 518 AEKTGLIVALGEFVLREACRQMHAWQKRFGR--LKMAVNISARQF-QPGLPDTVASALAD 574
           AE+T LI+ +GE+VL EACRQ  AWQ R G+    +AVN+S  QF Q  L   V   LA+
Sbjct: 685 AEETNLILPIGEWVLAEACRQQMAWQ-RAGQPATTVAVNLSPVQFRQRNLVSLVQRVLAE 743

Query: 575 AGLDPGLLELEITETTMMRDLALTVSVLERLTTGGIAVAIDDFGTGHSSLYYLKTFPISS 634
            GL    LELEITE+ +M D    V VL  L + GI +++DDFGTG+SSL YLK FP+  
Sbjct: 744 TGLPAAQLELEITESLLMDDTERAVEVLHELKSLGIRLSLDDFGTGYSSLSYLKRFPLDK 803

Query: 635 IKIDRSFVRDIPNDETDATIVTTVVSMGRNLGIGIVAEGVETEAQLDFLRSLECPEVQGY 694
           IKID+SFVRD+  D  DA I+  ++++   L +G++AEGVE ++QLD+L   +C EVQGY
Sbjct: 804 IKIDQSFVRDMIKDSGDAAIIQAIIAIAAKLELGVIAEGVENQSQLDYLALHQCGEVQGY 863

Query: 695 YFSKPLP 701
            FS P+P
Sbjct: 864 LFSPPVP 870