Pairwise Alignments

Query, 715 a.a., response regulator/sensory box/GGDEF domain/EAL domain protein (TIGR) from Desulfovibrio vulgaris Hildenborough JW710

Subject, 959 a.a., PAS domain S-box/diguanylate cyclase (GGDEF) domain-containing protein from Dechlorosoma suillum PS

 Score =  388 bits (996), Expect = e-112
 Identities = 234/564 (41%), Positives = 328/564 (58%), Gaps = 9/564 (1%)

Query: 147 RELRVSNEQLRSTQSELEDKSLFLET---LIESLPNPLFYKTLDGVYIGCNKAFSQLLGI 203
           R  R   E L S  ++L + +  L+    + ES    +     D   I  N+AF+++ G 
Sbjct: 377 RLFRQYREDLDSRNAQLLENARDLKLAAQVFESGNEGMVITDGDNRIITVNQAFTRITGY 436

Query: 204 PREKMVGRSARDLLPDHAYAQIIAGDCPSGSDAGEHSCVFDILGADGHIHTLALYKSTYS 263
             E++VG++          A           D G  S        DG ++   L  S+  
Sbjct: 437 RPEEVVGQNPAIFSSGRHDADFYRQMWHQLRDTGAWSGEIWNRRKDGSLYPEWLNISSVR 496

Query: 264 DSQGQVSGIVGTFLDITELKRKEAQIVHQATHDELTGLLNRFGMRQHVDRLIVGGQMS-- 321
           D  GQ S  +  F DITE K  EAQ+ H A +D LT L NR  ++  + + I   + +  
Sbjct: 497 DEGGQASHYIAAFSDITERKAAEAQVRHLAEYDALTNLPNRVLLQDRLGQAIAAARRAGS 556

Query: 322 -FALLVIDLDDFKTINDSLGHALGDRLLHKAAERIVELVGSQGIVGRPGGDEYVVLLYNV 380
             ALL +DLD FK INDSLGH +GD++L +  ER++  V +   V R GGDE+V+LL  +
Sbjct: 557 CLALLFLDLDRFKNINDSLGHTVGDQVLCQVGERLLTAVRASDTVSRLGGDEFVLLLPQL 616

Query: 381 DAEA-AHAMARRILDIFTDSLSVSGHEVYISLSIGIAVYPEDGDDAANLFKCCDIAMYRA 439
           ++ A A ++A ++L      L++  +E+ ++ SIGIAV+PEDG+D   L K  D AMY A
Sbjct: 617 ESPAQAASVAEKLLLTLATPLAIDDYELAVTPSIGIAVFPEDGEDGDTLLKNADAAMYVA 676

Query: 440 KEEGGARAQRYLAAMQDVITSRLALEKNLRKALERGEFVLHYQPKVDIRTGAVTGMEALV 499
           KE G    Q + AAM   ++ RL LE NLR+AL R E  LHYQP+ D+ +G + G EAL+
Sbjct: 677 KESGRNNYQYFTAAMNARVSQRLLLENNLRQALARQELALHYQPQYDLHSGTLVGCEALL 736

Query: 500 RWVRDDGTIVPPQDFIPVAEKTGLIVALGEFVLREACRQMHAWQKR-FGRLKMAVNISAR 558
           RW + +  ++PP  FIPVAE+TGLI+ +G++VLREACRQ  AWQ      L +AVNISA 
Sbjct: 737 RWRQPEQGLIPPDRFIPVAEETGLILPIGQWVLREACRQAQAWQDAGLPPLVVAVNISAV 796

Query: 559 QF-QPGLPDTVASALADAGLDPGLLELEITETTMMRDLALTVSVLERLTTGGIAVAIDDF 617
           QF Q  L   V  ALA +GL P  LELE+TE+ +M D       L +L   GI +A+DDF
Sbjct: 797 QFRQANLAALVQEALAASGLSPCWLELELTESMLMEDGERHTQTLAQLKAMGIRLALDDF 856

Query: 618 GTGHSSLYYLKTFPISSIKIDRSFVRDIPNDETDATIVTTVVSMGRNLGIGIVAEGVETE 677
           GTG+SSL YLK F +  +KIDRSF+RD+P D  DA I T ++ M R+LG+  +AEGVETE
Sbjct: 857 GTGYSSLAYLKRFSLDKLKIDRSFIRDLPQDAEDAAITTAIIGMARDLGLETLAEGVETE 916

Query: 678 AQLDFLRSLECPEVQGYYFSKPLP 701
            Q  FL    C ++QG+  ++P+P
Sbjct: 917 QQWSFLAERGCAQMQGFLRARPMP 940