Pairwise Alignments

Query, 715 a.a., response regulator/sensory box/GGDEF domain/EAL domain protein (TIGR) from Desulfovibrio vulgaris Hildenborough JW710

Subject, 1281 a.a., PAS domain S-box/diguanylate cyclase (GGDEF) domain-containing protein from Dechlorosoma suillum PS

 Score =  382 bits (982), Expect = e-110
 Identities = 228/531 (42%), Positives = 324/531 (61%), Gaps = 17/531 (3%)

Query: 191  IGCNKAFSQLLGIPREKMVGRSARDLLPDHA----YAQIIAGDCPSGSDAGEHSCVFDIL 246
            I  N+AF  + G  +E+++G+  R L         Y Q+      +G+ AGE   ++D  
Sbjct: 748  ISVNRAFCDITGYAQEEVLGQDPRMLASGRHDKDFYRQMWEILRDTGAWAGE---IWD-R 803

Query: 247  GADGHIHTLALYKSTYSDSQ-GQVSGIVGTFLDITELKRKEAQIVHQATHDELTGLLNRF 305
              +G I+   +  +   D+Q G ++  +  F DITE K  EA+I H A HD LTGL NRF
Sbjct: 804  RKNGEIYPKWMTINAVHDTQSGALTHYITLFSDITERKETEARIHHLAHHDPLTGLPNRF 863

Query: 306  GMRQHVDRLIVGGQM---SFALLVIDLDDFKTINDSLGHALGDRLLHKAAERIVELVGSQ 362
             +   +++ +   +      A++ +DLD FKTINDSLGHA+GD LL + A R+   V   
Sbjct: 864  TLEARLEQSLADARRHGHKVAVMFMDLDRFKTINDSLGHAVGDSLLMEIAHRLRSAVRES 923

Query: 363  GIVGRPGGDEYVVLLYNVDA--EAAHAMARRILDIFTDSLSVSGHEVYISLSIGIAVYPE 420
              V R GGDE+VV+L +V+   +AAH +A +I++    SL V  HE++ S SIGI++YP+
Sbjct: 924  DTVARLGGDEFVVVLPDVEGANDAAH-VAGKIIEDVARSLRVGAHELHTSASIGISLYPD 982

Query: 421  DGDDAANLFKCCDIAMYRAKEEGGARAQRYLAAMQDVITSRLALEKNLRKALERGEFVLH 480
            DG+    + +  D AMY AK  G    Q + +AM    T RL LE+ LR+A+   E  LH
Sbjct: 983  DGETVPTVMQNADTAMYHAKAIGRNNFQFFASAMNRAATERLELERKLRQAMVNDELELH 1042

Query: 481  YQPKVDIRTGAVTGMEALVRWVRDDGTIVPPQDFIPVAEKTGLIVALGEFVLREACRQMH 540
            +QP+  +    VTG+EAL+RW   +  ++PP  FIP+AE+TGLIV +G++VL+ ACRQ+ 
Sbjct: 1043 FQPQFALAADRVTGVEALLRWRHPEDGLIPPDRFIPIAEETGLIVGIGDWVLQAACRQLK 1102

Query: 541  AW-QKRFGRLKMAVNISARQF-QPGLPDTVASALADAGLDPGLLELEITETTMMRDLALT 598
            AW  +    L+MAVN+S RQ  +   P  VA+ L + GL   LLELEITE+ +M      
Sbjct: 1103 AWLDQGLPPLRMAVNLSTRQLKEKEFPSRVAAILQETGLPAVLLELEITESGVMERPEEA 1162

Query: 599  VSVLERLTTGGIAVAIDDFGTGHSSLYYLKTFPISSIKIDRSFVRDIPNDETDATIVTTV 658
            ++ L+ L   G+ +AIDDFGTG+SSL YLK FPI  +KIDRSFVRDI  D  DA I    
Sbjct: 1163 ITTLQALNDMGVTLAIDDFGTGYSSLSYLKLFPIDRLKIDRSFVRDIERDPDDAAIARGT 1222

Query: 659  VSMGRNLGIGIVAEGVETEAQLDFLRSLECPEVQGYYFSKPLPPHAFEAWM 709
            +++  +LG+ +VAEGVET AQLD L +  C EVQGY+FS+PLP  A  A++
Sbjct: 1223 IALAHSLGLEVVAEGVETSAQLDMLAADGCDEVQGYFFSRPLPLAAATAFL 1273



 Score = 28.5 bits (62), Expect = 0.002
 Identities = 15/52 (28%), Positives = 30/52 (57%), Gaps = 1/52 (1%)

Query: 153 NEQLRSTQSELEDKSLFLETLIESLPNPLFYKTLDGVYIGCNKAFSQLLGIP 204
           +E  R+ Q+ L +++  L+ ++E+LP+ +     +   I CN+ F  LL +P
Sbjct: 587 SESKRNEQA-LRNQNAILQNILENLPDGVSLYDPEQRMIACNERFRTLLDLP 637



 Score = 27.3 bits (59), Expect = 0.005
 Identities = 11/26 (42%), Positives = 18/26 (69%)

Query: 267 GQVSGIVGTFLDITELKRKEAQIVHQ 292
           GQ++G + T+ DI+E KR E  + +Q
Sbjct: 574 GQLTGFITTYTDISESKRNEQALRNQ 599