Pairwise Alignments

Query, 715 a.a., response regulator/sensory box/GGDEF domain/EAL domain protein (TIGR) from Desulfovibrio vulgaris Hildenborough JW710

Subject, 1158 a.a., PAS domain S-box/diguanylate cyclase (GGDEF) domain-containing protein from Dechlorosoma suillum PS

 Score =  400 bits (1029), Expect = e-115
 Identities = 262/697 (37%), Positives = 379/697 (54%), Gaps = 38/697 (5%)

Query: 43   DVFRAEHPDLILVDLRMPVMGGMEVVAHMREEAPGVPVIVVSGAGILEEAVEALRRGAWD 102
            DV +A H + +L +         E    M E    + +++ +G G + +A  A    A D
Sbjct: 472  DVDQARHQEEVLRESE-------ERYRQMFENNTSIKLLIDAGDGAIVDANPA----AAD 520

Query: 103  YVTKPVLDMRVLEHAVMKAL--ERAR----LLDERQR----YQERL------EFEVEA-- 144
            +   P+  +R +  A +  L  E  R    L D++QR    ++ RL      E EV +  
Sbjct: 521  FYGYPLDTLRRMNIAQLNQLSVEEVRAEMALADQQQRRYFNFRHRLASGEVREVEVHSGP 580

Query: 145  ---RTRELRVSNEQLRSTQSELEDKSLFLETLIESLPNPLFYKTLDGVYIGCNKAFSQLL 201
               R R L  S     + +   E++      + E     +     +   +  N+AF ++ 
Sbjct: 581  VLLRGRRLLYSIIHDITARRRAEEQLRLSAKVFEGASEGIVICDRNNRIMSVNRAFVEIT 640

Query: 202  GIPREKMVGRSARDLLPDHAYAQIIAGDCPSGSDAGEHSCVFDILGADGHIHTLALYKST 261
            G    ++ GR  R L      A   A        AG            G ++   L  +T
Sbjct: 641  GYAEAEVQGRDPRVLNSGRHDAAFFANLWHHLKTAGTWQGEIWNRRKGGEVYPEWLSITT 700

Query: 262  YSDSQGQVSGIVGTFLDITELKRKEAQIVHQATHDELTGLLNRFGMRQHVDRLIVGGQM- 320
              D  G+VS  V  F D++E KR E  I   A HD LTGL NR  +   + + I   +  
Sbjct: 701  VRDEAGEVSNYVAVFADVSERKRNEEHIRFLAEHDYLTGLPNRSLLHDRLQQAIALAERN 760

Query: 321  --SFALLVIDLDDFKTINDSLGHALGDRLLHKAAERIVELVGSQGIVGRPGGDEYVVLLY 378
              S AL+ IDLD FK INDSLGH +GD+LL +   RI   V S   V RPGGDE+++LL 
Sbjct: 761  SESLALMFIDLDRFKNINDSLGHQVGDQLLQEVGRRIQACVRSADTVSRPGGDEFIILLP 820

Query: 379  NVDA-EAAHAMARRILDIFTDSLSVSGHEVYISLSIGIAVYPEDGDDAANLFKCCDIAMY 437
            +++  + A  +A ++L+       + GHE+ I+ SIGIAV+PEDG D   L K  D AMY
Sbjct: 821  SIETPQDAARVAEKLLESLNRPYQLGGHELVITASIGIAVFPEDGRDFQTLVKNADAAMY 880

Query: 438  RAKEEGGARAQRYLAAMQDVITSRLALEKNLRKALERGEFVLHYQPKVDIRTGAVTGMEA 497
             +KE G      +   M   +  RL+LE +LR+ALER EF+L+YQP+VD+ +G V G EA
Sbjct: 881  YSKEAGRDSFHFFTPDMNARVFERLSLENSLRRALERQEFLLYYQPQVDMPSGRVIGFEA 940

Query: 498  LVRWVRDDGTIVPPQDFIPVAEKTGLIVALGEFVLREACRQMHAWQKR-FGRLKMAVNIS 556
            L+RW      +V P  FIPVAE +GLIV +GE+VL EACRQ  AWQ++    + +AVNIS
Sbjct: 941  LIRWQHPQMGLVSPARFIPVAEDSGLIVPIGEWVLGEACRQNRAWQEQGMPAVPVAVNIS 1000

Query: 557  ARQF-QPGLPDTVASALADAGLDPGLLELEITETTMMRDLALTVSVLERLTTGGIAVAID 615
            A QF QP    +V  ALA++GL+P  LELE+TE+ M+        +L+RL   G+ ++ID
Sbjct: 1001 ALQFRQPQFEASVERALAESGLEPAWLELELTESMMLHQGQGATDLLDRLKARGVRLSID 1060

Query: 616  DFGTGHSSLYYLKTFPISSIKIDRSFVRDIPNDETDATIVTTVVSMGRNLGIGIVAEGVE 675
            DFGTG+SSL YLK  P+  +KID++FVRDI +D   A I  T++ M  NLG+ ++AEGVE
Sbjct: 1061 DFGTGYSSLAYLKRLPLDKLKIDQAFVRDIASDAGGAAITATIIQMAHNLGLSVIAEGVE 1120

Query: 676  TEAQLDFLRSLECPEVQGYYFSKPLPPHAFEAWMENR 712
            TEAQL+FL++ +C   QG+YF++P+P     A+ ++R
Sbjct: 1121 TEAQLEFLQAHDCASAQGFYFARPMPAADIRAFWDDR 1157