Pairwise Alignments

Query, 715 a.a., response regulator/sensory box/GGDEF domain/EAL domain protein (TIGR) from Desulfovibrio vulgaris Hildenborough JW710

Subject, 874 a.a., PAS domain S-box/diguanylate cyclase (GGDEF) domain-containing protein from Dechlorosoma suillum PS

 Score =  389 bits (999), Expect = e-112
 Identities = 228/548 (41%), Positives = 316/548 (57%), Gaps = 5/548 (0%)

Query: 170 LETLIESLPNPLFYKTLDGVYIGCNKAFSQLLGIPREKMVGRSARDLLPDHAYAQIIAGD 229
           L   +E  P  +     +GV    N  F++  G   E+ VG     L       ++    
Sbjct: 325 LSRAVEQSPATIVITDTNGVIEYVNPKFTRTTGYSAEEAVGLKPSVLKSGETPLEVYQEL 384

Query: 230 CPSGSDAGEHSCVFDILGADGHIHTLALYKSTYSDSQGQVSGIVGTFLDITELKRKEAQI 289
             + +  G+   VF     +G ++      S  +D   +++  V    DITE +R+E +I
Sbjct: 385 WSTIASGGQWEGVFHNRRRNGELYWEHATISPITDDNQRITHFVAVKEDITEKRRQEDRI 444

Query: 290 VHQATHDELTGLLNRFGMRQHVDRLIVGG---QMSFALLVIDLDDFKTINDSLGHALGDR 346
              A  DELTGL NR  +   V + +      Q + ALL IDLD+FKT+NDSLGH  GDR
Sbjct: 445 HQLAYFDELTGLPNRTLLHDRVSQCLAAAEREQETLALLFIDLDNFKTVNDSLGHFTGDR 504

Query: 347 LLHKAAERIVELVGSQGIVGRPGGDEYVVLLYNVDAEAAHAMARRILDIFTDSLSVSGHE 406
           LL   A+R+   V     V R GGDE+VV+L +   + A  +AR+I+D       + GH+
Sbjct: 505 LLQSVAQRLKGCVRDSDTVSRLGGDEFVVVLADAQLDGASQVARKIIDRVGQPFVIDGHQ 564

Query: 407 VYISLSIGIAVYPEDGDDAANLFKCCDIAMYRAKEEGGARAQRYLAAMQDVITSRLALEK 466
           + ++ SIGI+++P D  D  +L K  D AMY+AKE G    Q + A M  +   RL LE 
Sbjct: 565 LTVTPSIGISLFPHDARDFQSLLKNADTAMYQAKESGRNAYQFFTAEMNVLAFERLVLEN 624

Query: 467 NLRKALERGEFVLHYQPKVDIRTGAVTGMEALVRWVRDDGTIVPPQDFIPVAEKTGLIVA 526
            LR+A+ER EFVLHYQP+VD+ +G V G EALVRW+  +  +VPP  FIPVAE +GLI A
Sbjct: 625 ALRQAVERQEFVLHYQPQVDMGSGRVIGAEALVRWLHPELGMVPPARFIPVAEDSGLIGA 684

Query: 527 LGEFVLREACRQMHAWQKR-FGRLKMAVNISARQF-QPGLPDTVASALADAGLDPGLLEL 584
           +G++VL EACRQ  AWQ+     + +AVN+SA Q  Q  L ++VA  L   GL+   LEL
Sbjct: 685 IGDWVLYEACRQNRAWQEAGLPAIPVAVNLSAVQLRQSELHESVAELLRRTGLESRYLEL 744

Query: 585 EITETTMMRDLALTVSVLERLTTGGIAVAIDDFGTGHSSLYYLKTFPISSIKIDRSFVRD 644
           E+TE T+M D   TV  L RL   G+ ++IDDFGTG+SSL YLK FPI  +KID+SFVRD
Sbjct: 745 ELTERTVMEDAEATVRCLRRLDEMGVMLSIDDFGTGYSSLSYLKRFPIDKLKIDQSFVRD 804

Query: 645 IPNDETDATIVTTVVSMGRNLGIGIVAEGVETEAQLDFLRSLECPEVQGYYFSKPLPPHA 704
           I  D  D  I   ++SMG +L + ++AEGVET  QL+ L    C E QG++F +P+P   
Sbjct: 805 IVADADDQAIAVAIISMGHSLRLRVIAEGVETAEQLEILHRHGCDEAQGFHFGRPMPADE 864

Query: 705 FEAWMENR 712
           F A++  R
Sbjct: 865 FAAYLARR 872



 Score = 37.4 bits (85), Expect = 3e-06
 Identities = 37/158 (23%), Positives = 66/158 (41%), Gaps = 10/158 (6%)

Query: 135 QERLEFEVEARTRELRVSNEQLRSTQSELEDKSLFLETLIESLPNPLFYKTLDGVYIGCN 194
           ++RL     A    L + +  LR +Q++L         L+E  P  + +   +      N
Sbjct: 172 EQRLLGVALANLVSLALEHAALRQSQAQLHSLEERYLRLLEFCPTGIIHYDTELHITYSN 231

Query: 195 KAFSQLLGIPREKMVG---RSARDLLPDHAYAQIIAGDCPSGSDAGEHSCVFDILGADGH 251
           + F+ ++G+P E++        +D  P  A A ++ G   +G   GE+          G 
Sbjct: 232 QQFANIIGVPLERLQDLDMAKLQDQRPLPALAAVLEG--RTGRFEGEYRA-----SLSGR 284

Query: 252 IHTLALYKSTYSDSQGQVSGIVGTFLDITELKRKEAQI 289
              ++L  +   D  GQ+ G +    D TE KR E Q+
Sbjct: 285 QLWVSLVAAPVLDQGGQLLGGIAIVEDATERKRAELQL 322