Pairwise Alignments

Query, 715 a.a., response regulator/sensory box/GGDEF domain/EAL domain protein (TIGR) from Desulfovibrio vulgaris Hildenborough JW710

Subject, 739 a.a., response regulator receiver modulated diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(s) (RefSeq) from Desulfovibrio vulgaris Miyazaki F

 Score =  845 bits (2182), Expect = 0.0
 Identities = 443/721 (61%), Positives = 534/721 (74%), Gaps = 8/721 (1%)

Query: 1   MSDSPARILCIDDDDADRMNLVAYLEDSGYIVLEAANGRAGLDVFRAEHPDLILVDLRMP 60
           M   PARIL IDDD   R NLVAYLEDSG+ V+EA NGR GL+ F    PDL+LVDLRMP
Sbjct: 1   MLHRPARILTIDDDVNVRSNLVAYLEDSGFDVIEAENGRRGLEAFTEHAPDLVLVDLRMP 60

Query: 61  VMGGMEVVAHMREEAPGVPVIVVSGAGILEEAVEALRRGAWDYVTKPVLDMRVLEHAVMK 120
           VMGGMEV+  +RE+AP +PVIVVSG G+LEEAVEALR GAWDYVTKPV DMRVLEHAV K
Sbjct: 61  VMGGMEVLERLREDAPEIPVIVVSGVGVLEEAVEALRHGAWDYVTKPVTDMRVLEHAVNK 120

Query: 121 ALERARLLDERQRYQERLEFEVEARTRELRVSNEQLRSTQSELEDKSLFLETLIESLPNP 180
           ALERARLL+ER+RY+E LE EV  RTRELR +NE+L   Q+ L++K+ FLE L+E +PNP
Sbjct: 121 ALERARLLEERKRYREHLEQEVLERTRELRETNERLVEYQALLQEKNQFLEALVEGMPNP 180

Query: 181 LFYKTLDGVYIGCNKAFSQLLGIPREKMVGRSARDLLPDHAYAQIIAGD---CPSGSDAG 237
           +FYKTL+G YIGCN+AFS+L+G   E +VGRS  ++LP     ++            D  
Sbjct: 181 VFYKTLEGNYIGCNRAFSRLIGRAPEDIVGRSVHEILPQEQACRVEDSGRRLTVQDDDGA 240

Query: 238 EHSCVFDILGADGHIHTLALYKSTYSDSQGQVSGIVGTFLDITELKRKEAQIVHQATHDE 297
            +SC+ D+  A G    L LYKS + D  GQ +G VGTFLD++ELKRKEAQIVHQATHDE
Sbjct: 241 GYSCMIDLRDAAGEDRVLVLYKSYFRDRTGQRAGEVGTFLDVSELKRKEAQIVHQATHDE 300

Query: 298 LTGLLNRFGMRQHV-DRLIVGG-QMSFALLVIDLDDFKTINDSLGHALGDRLLHKAAERI 355
           LTGL NR G+RQ + D  + GG     A+L +D+D+FKT+NDSLGHA+GD LL   A R+
Sbjct: 301 LTGLPNRMGLRQRMEDHALKGGPDARLAVLYLDMDNFKTVNDSLGHAVGDELLRAVAGRL 360

Query: 356 VELVGSQGIVGRPGGDEYVVLL---YNVDAEAAHAMARRILDIFTDSLSVSGHEVYISLS 412
           V +   + +V R GGDE+VVLL      D E A   + RI D FT   + + HE+Y+  S
Sbjct: 361 VGMAPRRDMVARLGGDEFVVLLPLSAEGDGELAETESARIQDSFTRPFNAADHELYVMPS 420

Query: 413 IGIAVYPEDGDDAANLFKCCDIAMYRAKEEGGARAQRYLAAMQDVITSRLALEKNLRKAL 472
           IGI+V PEDG D A L K  +IAMYRAKE+GGAR +R+  AM D +T RLA+EK++RK L
Sbjct: 421 IGISVAPEDGRDPATLLKNAEIAMYRAKEQGGARFRRFTQAMNDDVTRRLAIEKSIRKGL 480

Query: 473 ERGEFVLHYQPKVDIRTGAVTGMEALVRWVRDDGTIVPPQDFIPVAEKTGLIVALGEFVL 532
           E  EFV+ YQP+VDI TG VTGMEALVRW R DGT+VPP +FIPVAE TGL+VALGE VL
Sbjct: 481 ENDEFVVFYQPRVDIVTGQVTGMEALVRWARPDGTLVPPLEFIPVAEDTGLVVALGERVL 540

Query: 533 REACRQMHAWQKRFGRLKMAVNISARQFQPGLPDTVASALADAGLDPGLLELEITETTMM 592
           R+AC Q   W    G L++AVNISARQFQP L D V +ALA++GL P  LELEITETTMM
Sbjct: 541 RDACIQTRRWTDELGPLRIAVNISARQFQPDLLDRVQAALAESGLPPSQLELEITETTMM 600

Query: 593 RDLALTVSVLERLTTGGIAVAIDDFGTGHSSLYYLKTFPISSIKIDRSFVRDIPNDETDA 652
           RDL  +V++LERL   GI++AIDDFGTGHSSLYYLK FPI +IKIDRSFVRD+P DE DA
Sbjct: 601 RDLPTSVAILERLAAQGISIAIDDFGTGHSSLYYLKNFPIDTIKIDRSFVRDVPGDEGDA 660

Query: 653 TIVTTVVSMGRNLGIGIVAEGVETEAQLDFLRSLECPEVQGYYFSKPLPPHAFEAWMENR 712
           TIV+T+V+MGRNL + +VAEGVET+ QL FLR+  C EVQGYY+SKPLP   F  WM   
Sbjct: 661 TIVSTIVTMGRNLSLNVVAEGVETDDQLGFLRAHGCREVQGYYYSKPLPADGFADWMRAA 720

Query: 713 L 713
           L
Sbjct: 721 L 721