Pairwise Alignments

Query, 715 a.a., response regulator/sensory box/GGDEF domain/EAL domain protein (TIGR) from Desulfovibrio vulgaris Hildenborough JW710

Subject, 1183 a.a., EAL domain-containing protein from Ralstonia sp. UNC404CL21Col

 Score =  362 bits (930), Expect = e-104
 Identities = 226/582 (38%), Positives = 324/582 (55%), Gaps = 36/582 (6%)

Query: 148  ELRVSNEQLRSTQSELEDKSLFLETLIESLPNPLFYKT-----LDGVYIGCNKAFSQLLG 202
            E R S+EQLR            L  ++ES+P+ +         L  VY+  N  F ++ G
Sbjct: 620  ERRESDEQLR-----------LLRRVVESVPSGITVADAQEPDLPIVYV--NPGFERMTG 666

Query: 203  IPREKMVGRSARDLLPDHAYAQIIAGDCPSGSDAGEHSCVFDILGADGHIHTLALYKSTY 262
               E+++GR+AR L         +     +  D  E   +      DGH        S  
Sbjct: 667  YRAEEVLGRNARFLHSSEPGQPALNEVRTALRDESEIRVLLRNFRKDGHAFLNNFLLSPV 726

Query: 263  SDSQGQVSGIVGTFLDITELKRKEAQIVHQATHDELTGLLNRFGMRQHVDRLI---VGGQ 319
             D++G V+  VG   D+TE +    ++   AT D LTGL NR  +   V + +      +
Sbjct: 727  RDAKGAVTHYVGIQDDVTEQEMTRTRLAQHATIDPLTGLPNRTLLADRVQQSVEMAARQR 786

Query: 320  MSFALLVIDLDDFKTINDSLGHALGDRLLHKAAERIVELVGSQGIVGRPGGDEYVVLLYN 379
              F + ++++D FK +NDSLGH LGD +L + AER+ +   +   V R GGD + +++  
Sbjct: 787  SRFYVALVNIDRFKVVNDSLGHLLGDEVLRRVAERLRDAADTVDTVARFGGDVFALVI-- 844

Query: 380  VDAEAAHAMARRI---LDIFTDSLSVSGHEVYISLSIGIAVYPEDGDDAANLFKCCDIAM 436
                 +HA +R +    D+F + + V GHEV+++ SIG+A YP  G DA +L +  ++AM
Sbjct: 845  -----SHAGSRGVDFGFDLFAEPVRVEGHEVFVTASIGVAEYPAHGADADSLIRHAEMAM 899

Query: 437  YRAKEEGGARAQRYLAAMQDVITSRLALEKNLRKALERGEFVLHYQPKVDIRTGAVTGME 496
            Y AK+ G  R + +   M   ++ RL LE  +R ALE+G+F L YQP++D +TG V G+E
Sbjct: 900  YYAKQNGRNRLEFFAPEMDIGVSYRLNLEHQIRAALEQGQFRLLYQPQIDTKTGRVCGLE 959

Query: 497  ALVRWVRDDGTIVPPQDFIPVAEKTGLIVALGEFVLREACRQMHAWQKR--FGRLKMAVN 554
            AL+RW+     ++PP  FIPVAE++GLIV +G +VL EA +Q   W KR     L +AVN
Sbjct: 960  ALIRWIHPTRGLLPPAAFIPVAEESGLIVEIGNWVLTEAAQQRAEWHKRGLADDLTLAVN 1019

Query: 555  ISARQFQPG--LPDTVASALADAGLDPGLLELEITETTMMRDLALTVSVLERLTTGGIAV 612
            +S  QF+ G  LP T+       GL  G LELE+TE+ +M     T+  L  +   G+ +
Sbjct: 1020 VSPLQFKRGTVLP-TLLKLQRQYGLGSGFLELEVTESMLMEGTERTIEDLTAIRQLGVRI 1078

Query: 613  AIDDFGTGHSSLYYLKTFPISSIKIDRSFVRDIPNDETDATIVTTVVSMGRNLGIGIVAE 672
            AIDDFGTG+SSL YLK  PI  IKIDR+FV+DI  D  DA I TTVV +  NLG+ + AE
Sbjct: 1079 AIDDFGTGYSSLAYLKRLPIDLIKIDRAFVKDIDRDSNDAAICTTVVVLAHNLGVKVCAE 1138

Query: 673  GVETEAQLDFLRSLECPEVQGYYFSKPLPPHAFEAWMENRLR 714
            GVE  AQ  FL S +C  +QGYYFS+PL P A  A +E   R
Sbjct: 1139 GVEDAAQSAFLASHQCDVLQGYYFSEPLLPEAVTALLERDTR 1180



 Score = 29.6 bits (65), Expect = 0.001
 Identities = 18/69 (26%), Positives = 33/69 (47%), Gaps = 2/69 (2%)

Query: 221 AYAQIIAGDCPSGSDAGEHSCVFDILGADGHIHTLALYKSTYSDSQGQVSGIVGTFLDIT 280
           A+AQ +     S  D+ +H C   ++ A+    T+ +  S Y D  G+   +VG   DI+
Sbjct: 435 AFAQDLRAVLNSDRDSWQHVC--RVIDANRATRTVEIRASLYRDQDGRAVRMVGGVTDIS 492

Query: 281 ELKRKEAQI 289
           +    E ++
Sbjct: 493 QRSAIEQEL 501