Pairwise Alignments

Query, 715 a.a., response regulator/sensory box/GGDEF domain/EAL domain protein (TIGR) from Desulfovibrio vulgaris Hildenborough JW710

Subject, 1036 a.a., diguanylate cyclase from Burkholderia phytofirmans PsJN

 Score =  383 bits (984), Expect = e-110
 Identities = 216/523 (41%), Positives = 316/523 (60%), Gaps = 6/523 (1%)

Query: 194  NKAFSQLLGIPREKMVGRSARDLLPDHAYAQIIAGDCPSGSDAGEHSCVFDILGADGHIH 253
            N AF ++ G    +++G   R L  D    + +A    + +   E S V      DG + 
Sbjct: 504  NPAFMRITGYDATEVIGHDCRVLQRDDREQEGVALIRQALAANREVSAVVRNYRKDGALF 563

Query: 254  TLALYKSTYSDSQGQVSGIVGTFLDITELKRKEAQIVHQATHDELTGLLNRFGMRQHVDR 313
               L+ +   +  G ++  +G   D+T+L R + Q+ +QA +D LT L NR  +R  +  
Sbjct: 564  WNQLFIAPVPNQDGVITHHIGVINDVTDLMRYQEQLEYQANYDSLTRLPNRNLLRDRLQH 623

Query: 314  LIVGGQM---SFALLVIDLDDFKTINDSLGHALGDRLLHKAAERIVELVGSQGIVGRPGG 370
             ++  Q      A++ +DLD FK +NDSLGH++GDRLL   AER+     +   V R GG
Sbjct: 624  ALIVAQRHHKGVAVVFMDLDGFKNVNDSLGHSVGDRLLGVVAERLARCTRTSDTVARHGG 683

Query: 371  DEYVVLLYN-VDAEAAHAMARRILDIFTDSLSVSGHEVYISLSIGIAVYPEDGDDAANLF 429
            DE+V+++ + VD ++  A   R+    ++ + + G E+Y+  S+G +++P+DG+DA  L 
Sbjct: 684  DEFVIVMTDTVDEQSLIAWMERVRASISEPVWLDGTELYVGCSMGASLFPQDGEDAETLM 743

Query: 430  KCCDIAMYRAKEEGGARAQRYLAAMQDVITSRLALEKNLRKALERGEFVLHYQPKVDIRT 489
            K  D+AMYRAK+ G    Q Y   M     +RL LE+ LR+AL   EF+LHYQP+VDI +
Sbjct: 744  KKADLAMYRAKDMGRNTFQFYQPEMNASAGARLNLERRLRRALRDNEFLLHYQPQVDIES 803

Query: 490  GAVTGMEALVRWVRDDGTIVPPQDFIPVAEKTGLIVALGEFVLREACRQMHAWQ-KRFGR 548
            G + G EALVRW   +  +VPP  FIPVAE++GLI  L E+VLREACRQ  AWQ +    
Sbjct: 804  GQIVGTEALVRWRDPEVGLVPPSSFIPVAEESGLIGPLSEWVLREACRQNKAWQDEGLPP 863

Query: 549  LKMAVNISARQFQP-GLPDTVASALADAGLDPGLLELEITETTMMRDLALTVSVLERLTT 607
             +++VN+SAR FQ   +   V   LA+ GL+P  LELE+TE+T+MR+    VS+L  L  
Sbjct: 864  ARVSVNLSARVFQQRDIAKLVMQVLAETGLEPQYLELELTESTIMRNAEEAVSMLNELHA 923

Query: 608  GGIAVAIDDFGTGHSSLYYLKTFPISSIKIDRSFVRDIPNDETDATIVTTVVSMGRNLGI 667
             GI +AIDDFGTG+SSL YLK FP+  +KIDRSFV DI     D TI + ++++  +L +
Sbjct: 924  LGIGLAIDDFGTGYSSLSYLKRFPVDRLKIDRSFVSDIGVSGDDETITSAIIALAHSLKL 983

Query: 668  GIVAEGVETEAQLDFLRSLECPEVQGYYFSKPLPPHAFEAWME 710
             ++AEGVET AQLDFL+   C E+QG+YF+KPL   A    ++
Sbjct: 984  QVIAEGVETSAQLDFLKERACDEMQGFYFAKPLSTDAISELLQ 1026



 Score = 65.9 bits (159), Expect = 1e-14
 Identities = 38/131 (29%), Positives = 73/131 (55%), Gaps = 3/131 (2%)

Query: 158 STQSELEDKSLFLETLIESLPNPLFYKTLDGVYIGCNKAFSQLLGIP-REKMVGRSARDL 216
           + ++E +  +  LE +I+++P  +F+K ++  Y+GCN AF++  G+   E++VG+S  D 
Sbjct: 342 NAEAEAQRSNQMLEAVIDNIPQRIFWKDMESRYLGCNMAFARDAGLAYPEQVVGKSDAD- 400

Query: 217 LPDHAYAQIIAGDCPSGSDAGEHSCVFDI-LGADGHIHTLALYKSTYSDSQGQVSGIVGT 275
           +P   ++ ++          G     F++ L  DG   T    K  ++D  G+V G++G+
Sbjct: 401 MPWRDFSTLLNDHDKEVVSTGVPKMNFEVDLVIDGVHRTTVTSKLPFTDGDGRVIGVLGS 460

Query: 276 FLDITELKRKE 286
           + DITE KR +
Sbjct: 461 YTDITERKRAD 471