Pairwise Alignments

Query, 715 a.a., response regulator/sensory box/GGDEF domain/EAL domain protein (TIGR) from Desulfovibrio vulgaris Hildenborough JW710

Subject, 1228 a.a., diguanylate cyclase/phosphodiesterase with PAS/PAC and Chase sensor(s) (RefSeq) from Shewanella sp. ANA-3

 Score =  350 bits (898), Expect = e-100
 Identities = 206/521 (39%), Positives = 301/521 (57%), Gaps = 13/521 (2%)

Query: 189  VYIGCNKAFSQLLGIPREKMVGRSARDLLPDHAY----AQIIAGDCPSGSDAGEHSCVFD 244
            + +  N AF+Q+ G  R++++G++ R L  +       AQ+ A    +G   GE   V+D
Sbjct: 699  IIVDVNSAFTQITGYSRDEIIGKNCRFLEAERTDRSIDAQVRAALEQTGFWQGE---VWD 755

Query: 245  ILGADGHIHTLALYKSTYSDSQGQVSGIVGTFLDITELKRKEAQIVHQATHDELTGLLNR 304
                +G      L  S   D  G +S  +G+F DI+E K  E +I   A HD LT L NR
Sbjct: 756  -RHKEGFDFPKWLMMSIVRDETGAISHYIGSFTDISERKVNEERIHFLAHHDSLTLLPNR 814

Query: 305  FGMRQHVDRLIVGG---QMSFALLVIDLDDFKTINDSLGHALGDRLLHKAAERIVELVGS 361
              ++  ++++       Q   A++ ID+D FK IND+LGH +GD LL + A R+  ++G+
Sbjct: 815  LSLQSRLEKVFQEAFISQTQIAVMFIDMDHFKNINDTLGHHVGDMLLLEVARRLKNIMGN 874

Query: 362  QGIVGRPGGDEYVVLLYNVDAEAAHAMARRILDIFTDSLSVSGHEVYISLSIGIAVYPED 421
              IV R GGDE+VV+L + D +    +A  +      +  +    ++ S SIGI+++P D
Sbjct: 875  DDIVARLGGDEFVVVLSDTDHDRVAKVAEALRSGLNQTYLIDNKPLHSSPSIGISLFPTD 934

Query: 422  GDDAANLFKCCDIAMYRAKEEGGARAQRYLAAMQDVITSRLALEKNLRKALERGEFVLHY 481
            GD    L K  D+AMYRAK  G    Q + AAM  ++T R  +E  LR+A+   E +L+Y
Sbjct: 935  GDSVEALMKNADMAMYRAKAAGRNNYQFFTAAMNTLVTERQQIETGLRQAIACNELLLYY 994

Query: 482  QPKVDIRTGAVTGMEALVRWVRDDGTIVPPQDFIPVAEKTGLIVALGEFVLREACRQMHA 541
            QP+VDI +G V G+EAL+RW   +  +V P  FIP+AE+  +I+ +G++VL  A  Q+  
Sbjct: 995  QPQVDISSGQVVGVEALIRWQHPELGLVAPDRFIPIAEEIDMIIPIGQWVLENALAQLAE 1054

Query: 542  WQKRFGR-LKMAVNISARQFQPG-LPDTVASALADAGLDPGLLELEITETTMMRDLALTV 599
            W+ +  + L+MAVN+SA Q +   +   + + L    L  G LELEITE+  M+      
Sbjct: 1055 WRDKGAKGLRMAVNLSAHQLRKDTIVADIINVLTKHKLGKGALELEITESVAMQYPEQNA 1114

Query: 600  SVLERLTTGGIAVAIDDFGTGHSSLYYLKTFPISSIKIDRSFVRDIPNDETDATIVTTVV 659
             +L  L   GI +AIDDFGTG+SSL YLK  P+  +K+DRSFV+DI +D  DA I    +
Sbjct: 1115 KLLAELRQHGIELAIDDFGTGYSSLSYLKLLPLDRLKLDRSFVKDIESDPNDAAISAATI 1174

Query: 660  SMGRNLGIGIVAEGVETEAQLDFLRSLECPEVQGYYFSKPL 700
            SM   LG+ +VAEGVE EAQL  L  + C  VQGYYFSKPL
Sbjct: 1175 SMAHELGLTVVAEGVENEAQLVLLSGMGCDLVQGYYFSKPL 1215