Pairwise Alignments

Query, 715 a.a., response regulator/sensory box/GGDEF domain/EAL domain protein (TIGR) from Desulfovibrio vulgaris Hildenborough JW710

Subject, 674 a.a., diguanylate cyclase/phosphodiesterase (RefSeq) from Shewanella sp. ANA-3

 Score =  338 bits (866), Expect = 7e-97
 Identities = 179/435 (41%), Positives = 280/435 (64%), Gaps = 10/435 (2%)

Query: 279 ITELKRKEAQIVHQATHDELTGLLNRFGMRQHVDRLIVGGQM---SFALLVIDLDDFKTI 335
           + +  + ++++   AT D LTGL NR  + + +   I   ++   SFAL+ IDLD FK I
Sbjct: 225 LIQFSQTQSKLRKMATRDPLTGLPNRTLLLETIAVTIQRSRVHKSSFALMFIDLDRFKNI 284

Query: 336 NDSLGHALGDRLLHKAAERIVELVGSQGIVGRPGGDEYVVLLYNVDA-EAAHAMARRILD 394
           NDSLGHALGD+ L + A  +  +VG +G V R GGDE+V+L  +V + + A     ++L 
Sbjct: 285 NDSLGHALGDQFLARIARILERVVGDKGSVSRLGGDEFVILADSVHSPDQAADFVDKLLV 344

Query: 395 IFTDSLSVSGHEVYISLSIGIAVYPEDGDDAANLFKCCDIAMYRAKEEGGARAQRYLAAM 454
                + ++ H ++ + SIGI++YPEDG+ A +L +  DIAMY AK  G  +   +   M
Sbjct: 345 QLNVPIQLNEHAIHPAASIGISIYPEDGNSAEDLIRHADIAMYSAKAAGSNQWAFFKQQM 404

Query: 455 QDVITSRLALEKNLRKALERGEFVLHYQPKVDIRTGAVTGMEALVRWVRDDGTIVPPQDF 514
            +    RL  E +L  AL+  EF+L++QPK+D++TG +T  EAL+RW + DG ++ P  F
Sbjct: 405 TERAAVRLRTEASLHDALKNNEFLLYFQPKLDLQTGKITACEALIRW-QKDGRLISPISF 463

Query: 515 IPVAEKTGLIVALGEFVLREACRQMHAWQKRFG-RLKMAVNISARQF-QPGLPDTVASAL 572
           IPVAE+TG+I+ +G +V+ ++CR +  WQK++   + +A+N++++QF    L   +    
Sbjct: 464 IPVAEETGIIIPIGRWVIEQSCRVLRDWQKKYNYAIPIAINVASQQFADASLVSDIKQMA 523

Query: 573 ADAGLDPGLLELEITETTMMRDLALTVSVLERLTTGGIAVAIDDFGTGHSSLYYLKTFPI 632
               + P LLE+EITET++M D+ L ++ LE+L + G  +A+DDFGTG+SSL YL+  PI
Sbjct: 524 LRYQIQPELLEIEITETSLMNDIELAINKLEQLKSAGFGIAVDDFGTGYSSLSYLRHLPI 583

Query: 633 SSIKIDRSFVRDIPNDETDATIVTTVVSMGRNLGIGIVAEGVETEAQLDFLRSLECPEVQ 692
           +++KIDR FV D+P    D+ I +T++ +G+ L + IVAEG+E E QLD+L+  +C   Q
Sbjct: 584 TTMKIDRCFVSDLPG---DSAIASTILMLGKQLNLTIVAEGIENEQQLDWLKRNQCQIGQ 640

Query: 693 GYYFSKPLPPHAFEA 707
           G+YFS+PLP   FEA
Sbjct: 641 GFYFSQPLPQAEFEA 655