Pairwise Alignments

Query, 340 a.a., radical SAM domain protein (TIGR) from Desulfovibrio vulgaris Hildenborough JW710

Subject, 377 a.a., coproporphyrinogen III oxidase from Pedobacter sp. GW460-11-11-14-LB5

 Score = 45.8 bits (107), Expect = 2e-09
 Identities = 52/209 (24%), Positives = 82/209 (39%), Gaps = 12/209 (5%)

Query: 18  VFLPFAGCPQRCVFCAQDAQTGQSVEPVADVLRRVDAILEE----RARHNRPAVEIAFYG 73
           + +PF  C + C +C  D     S++   ++   VDAI +E    + R +     I   G
Sbjct: 6   IHIPF--CKKACHYC--DFHFSTSLKYADEM---VDAICKEIKMKKDRISGQIGSIYLGG 58

Query: 74  GTFSALPEDDQHACLALAARWRERGMVVAVRCSTRPDALPPGKAEALAGLGMNLIELGVQ 133
           GT S L ++                    +   T PD L   K + L  L +N   +G+Q
Sbjct: 59  GTPSILSQEALQKIFDTINHTFSVDSNAEITIETNPDDLTAQKLKELKQLPVNRFSVGIQ 118

Query: 134 TFDDTALAHAGRGCHGDDALTAARRVRDAGL-GLGLQLLPGMPGVTPDIFRADMKVVASL 192
           +F D  L    R     +A    RR +DAG   L L L+ G P +T   +  +++    L
Sbjct: 119 SFYDEDLTWMNRAHQAKEAEGCIRRSQDAGFENLSLDLIYGYPLLTDQKWLNNIQKAIEL 178

Query: 193 RPDCLRLYPCLVLEGTGLARLWREGRYGP 221
               +  Y   V   T LA   +  +  P
Sbjct: 179 EVPHISAYALTVEPRTALAHAIKNKKQTP 207