Pairwise Alignments

Query, 224 a.a., amino acid ABC tranporter, permease protein, His/Glu/Gln/Arg/opine family (TIGR) from Desulfovibrio vulgaris Hildenborough JW710

Subject, 229 a.a., amino acid ABC transporter membrane protein 2, PAAT family from Pseudomonas syringae pv. syringae B728a

 Score =  126 bits (317), Expect = 3e-34
 Identities = 73/197 (37%), Positives = 114/197 (57%), Gaps = 9/197 (4%)

Query: 12  LPALNRGLITSMMLIVPSATLGLLFGIIVGTGRVFGPAWVRKAGDIYTATFRGVPLVVQL 71
           LP L +G   ++ L+  +   GL+  I +G  R      VR     Y   FRG PL+VQL
Sbjct: 10  LPRLAQGATLTLELVAIAVIAGLILAIPMGIARASRHWPVRALPYAYIFFFRGTPLLVQL 69

Query: 72  MIIYFGLPN--------IGIYL-EPFPAAVLGFVLCSAAYNSEYVRGALLSIRQGQLKAA 122
            ++Y+GL          +  YL +PF  AV+   L +AAY +E +RGA+ ++  G+++AA
Sbjct: 70  FLVYYGLAQFESVRQSALWPYLRDPFWCAVVTMTLHTAAYIAEILRGAMQAVPPGEVEAA 129

Query: 123 QALGFSKLKTVLFIVVPQAVRRALPGCGNEIIYLIKYSSLAYVITCIELTGEGKVVAARS 182
           +ALG SK K + +IV+P+A R  LP   NE+I ++K S+LA  +T +ELTG  + + AR+
Sbjct: 130 RALGMSKWKALFYIVLPRAARIGLPAYSNEVILMLKASALASTVTLLELTGMARTIIART 189

Query: 183 FRFTEVFLFVGAYYLFL 199
           +   E+F   G +YL +
Sbjct: 190 YLPVEIFFAAGMFYLVM 206