Pairwise Alignments

Query, 225 a.a., amino acid ABC transporter, permease protein, His/Glu/Gln/Arg/opine family (TIGR) from Desulfovibrio vulgaris Hildenborough JW710

Subject, 237 a.a., ABC transporter for L-Arginine, permease component 1 (from data) from Burkholderia phytofirmans PsJN

 Score =  123 bits (309), Expect = 3e-33
 Identities = 76/226 (33%), Positives = 119/226 (52%), Gaps = 13/226 (5%)

Query: 1   MLDKLLVIWDALPYI----LEGSAVTIATVLGSLALGFCMGVPMAVAQVYGGRPVRYLVG 56
           M+D L   W A  Y     + G AVT+  ++ S+ +GFC  +P+AVA+V   R +   V 
Sbjct: 1   MIDILNQFWRAFLYWDGQRMSGLAVTLWLLVASVGIGFCAAIPLAVARVSKKRWLSTPVR 60

Query: 57  LYVWFFRGMPILVLLFLFYFGLF--------QALDLNL-SAFTASCLVLGMASAAYQSQI 107
           LY + FRG P+ V L L Y G++        Q LD    S F  + L   + + AY ++I
Sbjct: 61  LYTYVFRGTPLYVQLLLIYTGMYSLEFVRSHQLLDAFFRSGFHCAILAFALNTCAYTTEI 120

Query: 108 FRGSILALPQGQLKAARALGMSDGAAIRSIVLPQALRLSIPAWSNEYSILLKDSALAFVL 167
           F G+I +   G+++AARA GMS     R IV+P ALR ++P +SNE  ++L  + +AF  
Sbjct: 121 FAGAIRSTSHGEVEAARAYGMSWFTMYRRIVIPSALRRALPLYSNEVILMLHATTVAFTA 180

Query: 168 GTPEIMARTHFVASRTYEHLPLYMTAGALYFIITLAGLKVLRHLER 213
             P+I+       S TY+    +  A  +Y +++   + + R  ER
Sbjct: 181 TVPDILKVARDANSATYQSFDAFGLAALIYLVVSFVLVALFRRAER 226