Pairwise Alignments

Query, 251 a.a., conserved hypothetical protein (TIGR) from Desulfovibrio vulgaris Hildenborough JW710

Subject, 257 a.a., conserved hypothetical protein TIGR00726 (NCBI ptt file) from Shewanella oneidensis MR-1

 Score =  112 bits (281), Expect = 6e-30
 Identities = 84/255 (32%), Positives = 126/255 (49%), Gaps = 35/255 (13%)

Query: 16  VRCAFHTRCGGASQDPWGGGNISLEVGDAPEAAIANRRELSSSLGLDG---WAECRQVHG 72
           V  A   R GG S  P+   N+ L VGD P+  + NR  L+  LGL     W E  QVHG
Sbjct: 12  VAIAMTDRHGGVSLAPYDSLNLGLHVGDIPQQVLVNRGILAKQLGLATEPVWLE--QVHG 69

Query: 73  DVMV--FDPAPLDLATPPQTEADGLATSRP-----------GLGLVIKTADCQPVLIAHE 119
             ++   D   +DLA   Q +   ++ S P           G   V+ TADC PVL+ ++
Sbjct: 70  THVIDLADIKSVDLAPEAQAQQASISVSHPHIADASYTNLAGRVCVVMTADCLPVLLCNQ 129

Query: 120 SGRYIAALHVGWRGNRIDFPASGVRAFCDRYGLAPRDLLAVRGPSLGPAAAE-------- 171
            G  +AA H GWRG       + V  F  +    P +L+A  GP++GP A E        
Sbjct: 130 QGTEVAAAHAGWRGLCDGVIEASVAHFTSK----PNELIAYLGPAIGPMAFEVGAEVRDA 185

Query: 172 FVNFDSEWGDDFARWFRTRERTMDLWTLTRHQLAQAGLAPERIHALDLCTGTLADTFFSY 231
           F+  D      F    R  +   D+  L + +L + G++  ++++ D+CT +  D +FSY
Sbjct: 186 FMVKDPNAESCFIA--RGDKYLADIIGLAKLRLTKLGVS--QVYSADICTVSNMD-YFSY 240

Query: 232 RRERVTGRQASIIWI 246
           RR+++TGR AS+IW+
Sbjct: 241 RRDKITGRMASLIWL 255