Pairwise Alignments

Query, 607 a.a., sensory box/GGDEF domain protein (TIGR) from Desulfovibrio vulgaris Hildenborough JW710

Subject, 1036 a.a., sensory box protein (RefSeq) from Shewanella amazonensis SB2B

 Score =  149 bits (377), Expect = 4e-40
 Identities = 137/505 (27%), Positives = 218/505 (43%), Gaps = 46/505 (9%)

Query: 112 DVIHLQRPGHAQRACILHLRIDNAMKTIEGWV-------MDVTELDHRKEGLRDAHRFLQ 164
           D   L +  +A+   I++  +  A K I G V       MD++     +  +R +   L 
Sbjct: 274 DQYELNKRFYAKDGSIVYTHMTVACKRIAGKVQLVIAGFMDISAQTQSEMSVRASREQLS 333

Query: 165 NVVDALPCPLFFKDMNGAYTLFNHAFSDMLGLTPENLQGKNA---DDIAPPDLAAVYHSM 221
            V+ +     +  D+N      N   +DMLG + + ++  +    D I P D  AV  S+
Sbjct: 334 LVLASAELGFWDWDLNNDVIDRNERCADMLGCSVDEMRHNHRIWMDSIHPDDRMAVLKSI 393

Query: 222 DQALLDAKGPASQRYESAFTTPHGLRHVLFDKATVV--DDEGTARGLVGIITDITGRKQA 279
           D+ L       S   E      +G    + D   V+  D  G A  + G+  DIT  +  
Sbjct: 394 DRHLQGHTD--SHNVEYRIIRKNGETLWVRDTGRVMQKDSSGKAIRMCGVHLDITQVRHN 451

Query: 280 EDALRRVEARIRALVHNASDGFFSVTPEGYITESNPAMCKLLGLKVAPSSGER-GELTCV 338
           ++ +    +    + +N+S+    +  +G I   N A   + G       G    +  C 
Sbjct: 452 QEQMELAAS----VYNNSSEAMSVMDHKGNIITVNAAFADITGYSPKEVLGHHISQFYCP 507

Query: 339 APDDDESSDANRAQNILNLPDMFAEGREAWDAALHRLGTGAPPAPFEVRVRRDDGQTVWL 398
                            N P  + E  +A         TG        + +      +WL
Sbjct: 508 R----------------NKPAFYDEVNQAIKE------TGRWQGEMWQQHKNGKEYLIWL 545

Query: 399 SLALWPVDSVPEEDGPPPAVEGMAHDITAHKLAEMDLTRRIVTDPLTGLFNRAHMEDMLP 458
           +     V+++ +    P     +  DIT  K  E  + ++   DPLT L NR  + D L 
Sbjct: 546 T-----VNTIYDAYQRPHRRVALFSDITEKKAQEQLIWQQANYDPLTKLPNRRMLLDYLD 600

Query: 459 RMLTRAAEDGRTLGLLFIDLDGFKAVNDTYGHAVGDTLLQQVAGRLRRRLRHTDIAIRLG 518
           R ++ A+       LLF+DLD FK VNDT GH +GD LL + A R++  +R +D+  RLG
Sbjct: 601 REISLASRQNVRFALLFLDLDFFKEVNDTLGHDMGDKLLIECADRIKACIRDSDVVARLG 660

Query: 519 GDEFAVLLWDVAGKEAVERIGAGILSIMAPAFTCTDIPCSVSASIGASLYPQHADDAPSL 578
           GDEF VL+ D+     VER  + IL  +A  F        +S SIG +L+P+ A    +L
Sbjct: 661 GDEFTVLIRDIHDVGGVERAASNILKAIAEPFQLGPDSAYISVSIGITLFPEDASTREAL 720

Query: 579 LRLADEAMYRAKAEGKNRMAFAGPS 603
           L+ AD+AMY AK +G+NR  +  PS
Sbjct: 721 LKNADQAMYAAKEQGRNRFNYFTPS 745