Pairwise Alignments

Query, 607 a.a., sensory box/GGDEF domain protein (TIGR) from Desulfovibrio vulgaris Hildenborough JW710

Subject, 1431 a.a., sensory box protein (RefSeq) from Shewanella amazonensis SB2B

 Score =  137 bits (345), Expect = 3e-36
 Identities = 116/356 (32%), Positives = 162/356 (45%), Gaps = 39/356 (10%)

Query: 250  LFDKATVV--DDEGTARGLVGIITDITGRKQAEDALRRVEARIRALVHNASDGFFSVTPE 307
            + D+A +V  DD   A  + G I +I   KQAE+ LR  E  I     N S+G F +  E
Sbjct: 840  ILDRAKIVERDDSENALRMTGTIKNINNFKQAEEQLRLFERAIE----NISEGMFILDHE 895

Query: 308  GYITESNPAMCKLLGLKVAPSSGERGELTCVAPDDDESSDANRAQNILNLPDMFAEGREA 367
                E N A C +  +      G + + +C  PD    + + + + IL       +GR  
Sbjct: 896  FRFVEVNEACCDICLMDKDSFIGTQLQFSCY-PD----AYSEQVRIILR-----QQGR-- 943

Query: 368  WDAALHRLGTGAPPAPFEVRVRRDDGQTVWLSLALWPVDSVPEEDGPPPAVEGMAHDITA 427
            W A              EV  RR D  T  + L    VD++ +E G      G+  DI+ 
Sbjct: 944  WSA--------------EVESRRGDNSTFLMELT---VDAIYDEQGTLSHFVGVFSDISR 986

Query: 428  HKLAEMDLTRRIVTDPLTGLFNRAHMEDMLPRMLTRAAEDGRTLGLLFIDLDGFKAVNDT 487
             K  E +L +    D LTGL NR++++  L  ++ +         L+ +DLD FK +ND+
Sbjct: 987  RKQQEEELRKLTNNDLLTGLPNRSNLQVSLNNLVKKDTHHT----LMVLDLDNFKKINDS 1042

Query: 488  YGHAVGDTLLQQVAGRLRRRLRHTDIAIRLGGDEFAVLLWDVAGKEAVERIGAGILSIMA 547
             GH VGD LLQ V+ R+   L       RLGGDEFAVLL       +   I  G++    
Sbjct: 1043 LGHQVGDELLQLVSRRMSAALPGHTSLYRLGGDEFAVLLDKDPDIGSAAAIAKGLVDAFV 1102

Query: 548  PAFTCTDIPCSVSASIGASLYPQHADDAPSLLRLADEAMYRAKAEGKNRMAFAGPS 603
              F        V  SIG  LYP+   +  +LLR AD AMY AK+ G NR  F   S
Sbjct: 1103 APFELAGEKLVVGVSIGIVLYPEDEQNEQALLRKADIAMYHAKSAGGNRYQFYSES 1158