Pairwise Alignments

Query, 607 a.a., sensory box/GGDEF domain protein (TIGR) from Desulfovibrio vulgaris Hildenborough JW710

Subject, 1010 a.a., PAS domain S-box/diguanylate cyclase (GGDEF) domain-containing protein from Dechlorosoma suillum PS

 Score =  140 bits (353), Expect = 3e-37
 Identities = 114/348 (32%), Positives = 164/348 (47%), Gaps = 35/348 (10%)

Query: 259 DEGTARGLVGIITDITGRKQAEDALRRVEARI-RALVHNASDGFFSVTPEGYITESNPAM 317
           DE     +V    DIT  K AE     + +RI R ++  A         +G I   N A 
Sbjct: 686 DERQPFAVVTSFADITEIKAAE-----LSSRIYRDVLERAGRAILITDGDGTINNVNSAF 740

Query: 318 CKLLGLKVAPSSGERGELTCVAPDDDESSDANRAQNILNLPDMFAEGREAWDAALHRLGT 377
             LLG       G R               +NR     + P+ F+   +A        G 
Sbjct: 741 VSLLGYSREECLGRRTGFF----------RSNR-----HSPEFFSRMWQALKTRGEWRG- 784

Query: 378 GAPPAPFEVRVRRDDGQTVWLSLALWPVDSVPEEDGPPPAVEGMAHDITAHKLAEMDLTR 437
                  E+  RR  G+ + + L    V SV +  G       +  D+T  + ++ ++ R
Sbjct: 785 -------EIWNRRKTGEAILVEL---DVRSVTDAQGGVRQFVAVYQDVTELRRSQEEMWR 834

Query: 438 RIVTDPLTGLFNRAHMEDMLPRMLTRAAEDGRTLGLLFIDLDGFKAVNDTYGHAVGDTLL 497
               DPLTGL NR+   + L + L  A   G  LGLL++DLDGFK+VNDTYGH  GDT+L
Sbjct: 835 LAHHDPLTGLPNRSLFLERLDQALAHARRQGERLGLLYMDLDGFKSVNDTYGHQAGDTVL 894

Query: 498 QQVAGRLRRRLRHTDIAIRLGGDEFAVLLWDVAGKEAVERIGAGILSIMAPAFTCTDIPC 557
           Q+V  RL+  +R +D   RL GDEFAVLL  ++ ++ +ER+   I + +A          
Sbjct: 895 QEVGRRLQNAVRTSDTVARLAGDEFAVLLAHLSVEDDLERVMGEIENAVARPVMWQGQEL 954

Query: 558 SVSASIGASLYPQHADDAPSLLRLADEAMYRAKAEGKNRMAFAGPSRA 605
            V  SIG++++P  AD A SL+  AD+AMY AK + +     AGP  A
Sbjct: 955 RVGVSIGSAVFPDQADVAESLIGAADQAMYLAKQQHRQA---AGPGGA 999



 Score = 55.8 bits (133), Expect = 9e-12
 Identities = 100/386 (25%), Positives = 145/386 (37%), Gaps = 50/386 (12%)

Query: 75  PDAGAMIEGQTPRDLYASPTARDDILQRLQQAGEMTTDVIHLQRPGHAQRACILHLRIDN 134
           P   A +    PRD         +  Q  +Q G +      L  PG+ +R   L  R + 
Sbjct: 366 PSLQAFLARVNPRD---RKRIEVNFAQVREQGGSLDI-ACRLLLPGNVERYVHLGGRAER 421

Query: 135 ----AMKTIEGWVMDVTELDHRKEGLRDAH---RFLQNVVDALPCPLFFKDMNGAYTLFN 187
                   + G + DVT+  + ++ L DA    +F  +  DA     F  D N AY  F+
Sbjct: 422 DGSGRPSRLTGTLQDVTDYMNMQQALADAEERWKFALDGADAGVWDWFVAD-NRAY--FS 478

Query: 188 HAFSDMLGLTPENLQGKNAD---DIAPPDLAAVYHSMDQALLDAKGPASQRYESAFTTPH 244
             +  +LG   E L  ++ +    + P D          A+ D     +  YE  F   H
Sbjct: 479 PRWKAILGYRDEELPSRHEEWLERLHPDDRERAM----AAVTDHFAGRTPVYEMEFRLRH 534

Query: 245 ---GLRHVLF-DKATVVDDEGTARGLVGIITDITGRKQAEDALRRVEARIRALVHNASDG 300
                R VL   K    D EG    ++GII+DI+ RKQAE  L R EA  R+LV   ++G
Sbjct: 535 KDGNYRWVLSRGKVCARDPEGRPLRMLGIISDISARKQAELDLARSEAMQRSLVSAMAEG 594

Query: 301 FFSVTPEGYITESNPAMCKLL--GLKVAPSSGERGELTCVAPDDDESSDANRAQNILNLP 358
                  G I  +N +  ++L  G  +        E   V  D       +         
Sbjct: 595 VVVQDQAGKIISANASARRILRIGENLVGLDSTDPEWQAVREDGSPFPGCDH-------- 646

Query: 359 DMFAEGREAWDAALHRLGTGAPPAPFEVRVRRDDGQTVWLSLALWPVDSVPEEDGPPPAV 418
                       A+  L TG       + + R D   +WLS+   P++   E    P AV
Sbjct: 647 -----------PAMVTLRTGVSCDNIIMGLHRPDAGLIWLSVNSRPLNFADERQ--PFAV 693

Query: 419 EGMAHDITAHKLAEMDLTRRIVTDPL 444
                DIT  K AE  L+ RI  D L
Sbjct: 694 VTSFADITEIKAAE--LSSRIYRDVL 717