Pairwise Alignments

Query, 607 a.a., sensory box/GGDEF domain protein (TIGR) from Desulfovibrio vulgaris Hildenborough JW710

Subject, 1104 a.a., PAS domain S-box/diguanylate cyclase (GGDEF) domain-containing protein from Dechlorosoma suillum PS

 Score =  169 bits (429), Expect = 4e-46
 Identities = 129/371 (34%), Positives = 177/371 (47%), Gaps = 33/371 (8%)

Query: 228 AKGPASQRYESAFTTPHG-LRHVLFDKATVVDDEGTARGLVGIITDITGRKQAEDALRRV 286
           A G  +QR+E       G LR+V F   +V D+ G    L+    DIT RK+ E+  R  
Sbjct: 345 AAGGEAQRFEVTHMRRDGRLRYVDFILKSVEDEPGQPLQLLAEGRDITDRKEGEEQHRLA 404

Query: 287 EARIRALVHNASDGFFSVTPEGYITESNPAMCKLLGLKVAPSSGERGELTCVAPDDDESS 346
                ++  N+ DG     PEG I E N A C+L G     + G+   +         +S
Sbjct: 405 ----LSVFENSHDGILITNPEGLIIEVNRAFCELTGYAREEAIGQPARML--------NS 452

Query: 347 DANRAQNILNLPDMFAEGREAWDAAL-HRLGTGAPPAPFEVRVRRDDGQTVWLSLALWPV 405
             +       L  + +E R  W   + +R  +GA  A                   L  V
Sbjct: 453 GHHDRTYFRQLFQVVSE-RGFWKGEMWNRTKSGAVTA------------------VLMTV 493

Query: 406 DSVPEEDGPPPAVEGMAHDITAHKLAEMDLTRRIVTDPLTGLFNRAHMEDMLPRMLTRAA 465
            +V ++ G      G+  DIT  K  +  L R    D LTGL NR  M D L   + +A 
Sbjct: 494 SAVHDDGGRISHFVGVFSDITQQKENQRRLERLAHYDALTGLPNRTLMSDRLHLAMAQAQ 553

Query: 466 EDGRTLGLLFIDLDGFKAVNDTYGHAVGDTLLQQVAGRLRRRLRHTDIAIRLGGDEFAVL 525
              + L + ++DLDGFKA+ND++GH  GD LL  VA RLRR LR  D A RLGGDEF +L
Sbjct: 554 RRNKLLAVCYLDLDGFKAINDSHGHQAGDRLLMDVAERLRRSLRGGDTAARLGGDEFVLL 613

Query: 526 LWDVAGKEAVERIGAGILSIMAPAFTCTDIPCSVSASIGASLYPQHADDAPSLLRLADEA 585
           L D+     +E+I   +L  +A  F       SVS SIG ++YP    DA +L+R AD+A
Sbjct: 614 LNDLTALSELEQILERLLLSLAAPFALQGQTASVSGSIGVTIYPTDDADADTLVRHADQA 673

Query: 586 MYRAKAEGKNR 596
           MY AK  G+NR
Sbjct: 674 MYAAKQSGRNR 684



 Score = 41.6 bits (96), Expect = 2e-07
 Identities = 50/206 (24%), Positives = 82/206 (39%), Gaps = 30/206 (14%)

Query: 99  ILQRLQQAGEMTTDVIHLQRPGHAQRACILHLRIDNAMKTIEGWVMDVTE---------- 148
           + QRL+QA E       +   G AQR  + H+R D  ++ ++  +  V +          
Sbjct: 333 VQQRLRQAVE------RVAAGGEAQRFEVTHMRRDGRLRYVDFILKSVEDEPGQPLQLLA 386

Query: 149 ----LDHRKEGLRDAHRFLQNVVDALPCPLFFKDMNGAYTLFNHAFSDMLGLTPENLQGK 204
               +  RKEG  + HR   +V +     +   +  G     N AF ++ G   E   G+
Sbjct: 387 EGRDITDRKEG-EEQHRLALSVFENSHDGILITNPEGLIIEVNRAFCELTGYAREEAIGQ 445

Query: 205 NADDIAPPDLAAVY-HSMDQALLDA---KGPASQRYESAFTTPHGLRHVLFDKATVVDDE 260
            A  +        Y   + Q + +    KG    R +S   T      VL   + V DD 
Sbjct: 446 PARMLNSGHHDRTYFRQLFQVVSERGFWKGEMWNRTKSGAVTA-----VLMTVSAVHDDG 500

Query: 261 GTARGLVGIITDITGRKQAEDALRRV 286
           G     VG+ +DIT +K+ +  L R+
Sbjct: 501 GRISHFVGVFSDITQQKENQRRLERL 526



 Score = 28.5 bits (62), Expect = 0.002
 Identities = 20/62 (32%), Positives = 27/62 (43%), Gaps = 3/62 (4%)

Query: 371 ALHRLGTGAPPAPFEVRVRRDDGQTVWLSLALWPVDSVPEEDGPPPAVEGMAHDITAHKL 430
           A+ R+  G     FEV   R DG+  ++   L    SV +E G P  +     DIT  K 
Sbjct: 340 AVERVAAGGEAQRFEVTHMRRDGRLRYVDFIL---KSVEDEPGQPLQLLAEGRDITDRKE 396

Query: 431 AE 432
            E
Sbjct: 397 GE 398