Pairwise Alignments

Query, 607 a.a., sensory box/GGDEF domain protein (TIGR) from Desulfovibrio vulgaris Hildenborough JW710

Subject, 639 a.a., PAS domain S-box/diguanylate cyclase (GGDEF) domain-containing protein from Dechlorosoma suillum PS

 Score =  145 bits (367), Expect = 4e-39
 Identities = 100/273 (36%), Positives = 131/273 (47%), Gaps = 16/273 (5%)

Query: 340 PDDDESSDANRAQNILNLPDMFAEGREAWDAALHRLGTG-------------APPAPFEV 386
           P   E +   R   IL   + F     AW   +H   T               P    E 
Sbjct: 98  PLSKELTAGQRLHAILGYGENFLMDTHAWLTLVHPEDTARYNRAVSEHLKGLTPHFYCEY 157

Query: 387 RVRRDDGQTVWLSLALWPVDSVPEEDGPPPAVEGMAHDITAHKLAEMDLTRRIVTDPLTG 446
           RVR   G+  W++       +V +  G    + G   DIT  KL E  +      D LTG
Sbjct: 158 RVRAKSGEYRWIASR---GIAVRDARGVATLMAGSVTDITERKLHEERMRYLAHHDQLTG 214

Query: 447 LFNRAHMEDMLPRMLTRAAEDGRTLGLLFIDLDGFKAVNDTYGHAVGDTLLQQVAGRLRR 506
           L NR  + D LP+ LTRA        +LF+DLD FK +ND+ GH  GD LLQ VA RL+ 
Sbjct: 215 LPNRLLLADRLPQALTRAKRQQSRAAVLFVDLDRFKNINDSLGHNQGDRLLQSVARRLQE 274

Query: 507 RLRHTDIAIRLGGDEFAVLLWDVAGKEAVERIGAGILSIMAPAFTCTDIPCSVSASIGAS 566
            LR +D  +R GGDEF V+L D+   E   +IGA +L  +A  +        ++ASIG +
Sbjct: 275 CLRQSDTIVRQGGDEFIVILEDLQLPEQAGQIGAKLLETLASPYREDGYDFFLTASIGIA 334

Query: 567 LYPQHADDAPSLLRLADEAMYRAKAEGKNRMAF 599
           LYP   DDA +LLR AD AMY  K+ G N + F
Sbjct: 335 LYPDDGDDADTLLRNADTAMYEGKSSGGNTVRF 367