Pairwise Alignments

Query, 607 a.a., sensory box/GGDEF domain protein (TIGR) from Desulfovibrio vulgaris Hildenborough JW710

Subject, 999 a.a., PAS domain S-box/diguanylate cyclase (GGDEF) domain-containing protein from Dechlorosoma suillum PS

 Score =  144 bits (363), Expect = 2e-38
 Identities = 123/439 (28%), Positives = 183/439 (41%), Gaps = 40/439 (9%)

Query: 166 VVDALPCPLFFKDMNGAYTLFNHAFSDMLGLTPENLQGKNADDIAPPDLAAVYHSMDQAL 225
           ++DA+P P +  D  G Y   N AF    G   E + G   +D+   +           +
Sbjct: 333 LLDAIPDPAWLLDTQGTYLSVNEAFCRYAGRPMEEVIGHRVEDLFSEEETRRMTEGSLRV 392

Query: 226 LDAKGPASQRYESAFTTPHGLRHVLFDKATVVDDEGTARGLVGIITDITGRKQAEDALRR 285
           ++A+ P   R E     P G     F +A V D  G  R L G+  DI+ R +AE+  R 
Sbjct: 393 IEARSP--MREEVWLDLPRGRVPFEFLRAPVFDAAGQVRALAGVAWDISSRYEAEERRRL 450

Query: 286 VEARIRALVHNASDGFFSVTPEGYITESNPAMCKLLGLKVAPSSGERGELTCVAPDDDES 345
               I  +  ++ +    +   G+I   N A  +L G  V  S+G++ +           
Sbjct: 451 ----ITHVFDHSIEAILILDATGHIVTFNNAFAELSGYTVEESAGQQPDFLA-------- 498

Query: 346 SDANRAQNILNLPDMFAEGREAWDAALHRLGTGAPPAPFEVRVRRDDGQT--VWLSLALW 403
                  +  N PD  A+ R   D   + LG        E   RR DG    VW ++   
Sbjct: 499 -------SPCNEPDFRAQIRATLDRGENWLG--------EAIARRKDGSDCPVWCNIG-- 541

Query: 404 PVDSVPEEDGPPPAVEGMAHDITAHKLAEMDLTRRIVTDPLTGLFNRAHMEDMLPRMLTR 463
              ++  E G          D++  K A+  +      D LT L NR        R+L  
Sbjct: 542 ---AIVNEQGAIVNKVAFVTDLSEKKAAQAQIETLSNVDQLTTLPNR----QWFSRILGE 594

Query: 464 AAEDGRTLGLLFIDLDGFKAVNDTYGHAVGDTLLQQVAGRLRRRLRHTDIAIRLGGDEFA 523
             ++G    L+ +DLD    VND +GHA GD LL++V  RLR+ LR  DI  RLGGD+F 
Sbjct: 595 WLQEGCQGALVLLDLDQLSRVNDAFGHAAGDELLRRVGERLRKGLRPHDILGRLGGDQFG 654

Query: 524 VLLWDVAGKEAVERIGAGILSIMAPAFTCTDIPCSVSASIGASLYPQHADDAPSLLRLAD 583
           +L+       +V  +   +L I+A            +A  G +L+PQ  +D   LLR  D
Sbjct: 655 ILIDGRDDSRSVATVVRHLLDILAHPIQMQGSDVVTTACAGITLFPQDGNDVALLLRNVD 714

Query: 584 EAMYRAKAEGKNRMAFAGP 602
            AM+ AK    N   F  P
Sbjct: 715 TAMHHAKNSNLNSYHFFAP 733



 Score = 40.4 bits (93), Expect = 4e-07
 Identities = 31/127 (24%), Positives = 55/127 (43%), Gaps = 9/127 (7%)

Query: 158 DAHRFLQNVVDALPCPLFFKDMNGAYTLFNHAFSDMLGLTPENLQGKNADDIAPPDLAAV 217
           +  R + +V D     +   D  G    FN+AF+++ G T E   G+  D +A P     
Sbjct: 446 ERRRLITHVFDHSIEAILILDATGHIVTFNNAFAELSGYTVEESAGQQPDFLASPCNEPD 505

Query: 218 YHSMDQALLDA----KGPASQRYESAFTTPHGLRHVLFDKATVVDDEGTARGLVGIITDI 273
           + +  +A LD      G A  R +     P     V  +   +V+++G     V  +TD+
Sbjct: 506 FRAQIRATLDRGENWLGEAIARRKDGSDCP-----VWCNIGAIVNEQGAIVNKVAFVTDL 560

Query: 274 TGRKQAE 280
           + +K A+
Sbjct: 561 SEKKAAQ 567