Pairwise Alignments

Query, 607 a.a., sensory box/GGDEF domain protein (TIGR) from Desulfovibrio vulgaris Hildenborough JW710

Subject, 559 a.a., PAS domain S-box/diguanylate cyclase (GGDEF) domain-containing protein from Dechlorosoma suillum PS

 Score =  158 bits (399), Expect = 7e-43
 Identities = 129/429 (30%), Positives = 188/429 (43%), Gaps = 38/429 (8%)

Query: 174 LFFKDMNGAYTLFNHAFSDMLGLTPENLQGKNADDIAPPDLAAVYHSMDQALLDA---KG 230
           +F  D  G +   N AF  + G +  ++ G++   +  P          Q L D    +G
Sbjct: 149 IFILDREGRFETVNGAFCAITGYSEADIVGQDHHCLLLPQPGRPTPEFMQELADGGHWRG 208

Query: 231 PASQRYESAFTTPHGLRHVLFDKATVVDDEGTARGLVGIITDITGRKQAEDALRRVEARI 290
               +       P  L       + V D       +VG+  DIT RK  E AL   E R 
Sbjct: 209 ELWLQRRDGQVFPAALT-----LSPVCDGNRRLVQVVGLCADITERKGREIALLESEKRF 263

Query: 291 RALVHNASDGFFSVTPEGYITESNPAMCKLLGLKVAPSSGERGELTCVAPDDDESSDANR 350
           R  +  A  G   V  +G + + N A+C++LG   +  + ER     + PD+D ++D   
Sbjct: 264 RDFMEFAPVGMAIVNLDGRLGKVNQALCQILGY--SREALERLSFEDLTPDEDLAADL-- 319

Query: 351 AQNILNLPDMFAEGREAWDAALHRLGTGAPPA-PFEVRVRRDDGQTVWLSLALWPVDSVP 409
                              A   RL  G  P    E R  R DG  VW+ L    + S  
Sbjct: 320 -------------------AMWRRLRQGEMPVWQAEKRYLRSDGSPVWVELTAAVLRST- 359

Query: 410 EEDGPPPAVEGMAHDITAHKLAEMDLTRRIVTDPLTGLFNRAHMEDMLPRMLTRAAEDGR 469
              G     +    DI+  +  +  + +    D LTGL NR  ++D L + L RA    +
Sbjct: 360 --QGVAQCFDVQVEDISERRRDQEKIRQLAYFDALTGLPNRRLLQDRLEQALLRARRHQQ 417

Query: 470 TLGLLFIDLDGFKAVNDTYGHAVGDTLLQQVAGRLRRRLRHTDIAIRLGGDEFAVLLWDV 529
            +G+LF+DLD FK VND +GH VGD LL   A RL R +R  D   R GGDEF V+L +V
Sbjct: 418 QVGVLFLDLDHFKQVNDVHGHEVGDELLSAAARRLTRCVRQGDTVARQGGDEFIVVLAEV 477

Query: 530 AGKEAVERIGAGILSIMAPAFTCTDIPCSV---SASIGASLYPQHADDAPSLLRLADEAM 586
                V R    I++ +A  +        V   +AS+G +L+P H  D+ +L++ AD AM
Sbjct: 478 GAPAGVIRAAETIIASLAAPYELGQARIRVDVITASVGIALFPAHGSDSQTLMKHADLAM 537

Query: 587 YRAKAEGKN 595
           Y AK  G+N
Sbjct: 538 YAAKQAGRN 546



 Score = 31.2 bits (69), Expect = 1e-04
 Identities = 18/59 (30%), Positives = 26/59 (44%)

Query: 273 ITGRKQAEDALRRVEARIRALVHNASDGFFSVTPEGYITESNPAMCKLLGLKVAPSSGE 331
           +T +  A  AL R  A+   +  N S+G F +  EG     N A C + G   A   G+
Sbjct: 121 VTAQAFAHHALVRRGAQFSQIFENTSEGIFILDREGRFETVNGAFCAITGYSEADIVGQ 179