Pairwise Alignments

Query, 607 a.a., sensory box/GGDEF domain protein (TIGR) from Desulfovibrio vulgaris Hildenborough JW710

Subject, 1281 a.a., PAS domain S-box/diguanylate cyclase (GGDEF) domain-containing protein from Dechlorosoma suillum PS

 Score =  146 bits (369), Expect = 5e-39
 Identities = 134/470 (28%), Positives = 198/470 (42%), Gaps = 58/470 (12%)

Query: 145  DVTELDHRKEGLRDAHRFLQNVVDALPCPLFFKDMNGAYTLFNHAFSDMLGL-------- 196
            D++E    ++ LR+ +  LQN+++ LP  +   D        N  F  +L L        
Sbjct: 585  DISESKRNEQALRNQNAILQNILENLPDGVSLYDPEQRMIACNERFRTLLDLPDTLFAQG 644

Query: 197  --TPENLQGKNA--DDIAPPDLAAVYHSMDQALLDAKGPASQRYESAFTTPHGLRHVLFD 252
              T E++   NA   +  P D       + +AL      A  R     T     +  L D
Sbjct: 645  YPTLEDMVRFNARRGEYGPGDEERRTRGVLRALQRPNNTAVLRERPDGTVLEIRQVNLGD 704

Query: 253  KATVVDDEGTARGLVGIITDITGRKQAEDALRRVEARIRALVHNASDGFFSVTPEGYITE 312
             +T++           I TDIT R +AE  L+  E     +  N+ +          I  
Sbjct: 705  GSTII-----------IYTDITARHRAEAELKLAEK----VFANSPEAIMICDQGNRIIS 749

Query: 313  SNPAMCKLLGLKVAPSSGERGELTCVAPDDDESSDANRAQNILNLPDMFAEGREAWDAAL 372
             N A C + G       G+   +      D +       Q    L D  A   E WD   
Sbjct: 750  VNRAFCDITGYAQEEVLGQDPRMLASGRHDKDFY----RQMWEILRDTGAWAGEIWD--- 802

Query: 373  HRLGTGAPPAPFEVRVRRDDGQTV--WLSLALWPVDSVPE-EDGPPPAVEGMAHDITAHK 429
                            RR +G+    W++     +++V + + G       +  DIT  K
Sbjct: 803  ----------------RRKNGEIYPKWMT-----INAVHDTQSGALTHYITLFSDITERK 841

Query: 430  LAEMDLTRRIVTDPLTGLFNRAHMEDMLPRMLTRAAEDGRTLGLLFIDLDGFKAVNDTYG 489
              E  +      DPLTGL NR  +E  L + L  A   G  + ++F+DLD FK +ND+ G
Sbjct: 842  ETEARIHHLAHHDPLTGLPNRFTLEARLEQSLADARRHGHKVAVMFMDLDRFKTINDSLG 901

Query: 490  HAVGDTLLQQVAGRLRRRLRHTDIAIRLGGDEFAVLLWDVAGKEAVERIGAGILSIMAPA 549
            HAVGD+LL ++A RLR  +R +D   RLGGDEF V+L DV G      +   I+  +A +
Sbjct: 902  HAVGDSLLMEIAHRLRSAVRESDTVARLGGDEFVVVLPDVEGANDAAHVAGKIIEDVARS 961

Query: 550  FTCTDIPCSVSASIGASLYPQHADDAPSLLRLADEAMYRAKAEGKNRMAF 599
                      SASIG SLYP   +  P++++ AD AMY AKA G+N   F
Sbjct: 962  LRVGAHELHTSASIGISLYPDDGETVPTVMQNADTAMYHAKAIGRNNFQF 1011



 Score = 45.1 bits (105), Expect = 2e-08
 Identities = 52/193 (26%), Positives = 78/193 (40%), Gaps = 16/193 (8%)

Query: 141 GWVMDVTELDHRKEGLRDAHRFLQNVVDALPCPLFFKDMNGAYTLFNHAFSDMLGLTPEN 200
           G   D+TE    +E  R     L+ V+  +P  +   D +    L+N    ++LGL  E 
Sbjct: 450 GTTQDITERKLAEEEYRRQSTQLRAVLQNMPQGISVFDEHLRLQLWNEGMREVLGLPAEA 509

Query: 201 L-QGKNADDIAP-PDLAAVYHSMD--QALLDAKGPASQRYESAFTTPHGLRHVLFD-KAT 255
           L +G   +D+   P     Y   D  Q + + K  A Q        PH       D + T
Sbjct: 510 LYRGVPFEDLVRYPAQRGEYGPGDPEQHVQERKALAMQ------FKPHRFERTRLDGRTT 563

Query: 256 VVD-----DEGTARGLVGIITDITGRKQAEDALRRVEARIRALVHNASDGFFSVTPEGYI 310
           +V      D+G   G +   TDI+  K+ E ALR   A ++ ++ N  DG     PE  +
Sbjct: 564 LVQGEPLFDDGQLTGFITTYTDISESKRNEQALRNQNAILQNILENLPDGVSLYDPEQRM 623

Query: 311 TESNPAMCKLLGL 323
              N     LL L
Sbjct: 624 IACNERFRTLLDL 636



 Score = 33.9 bits (76), Expect = 4e-05
 Identities = 24/78 (30%), Positives = 33/78 (42%)

Query: 246 LRHVLFDKATVVDDEGTARGLVGIITDITGRKQAEDALRRVEARIRALVHNASDGFFSVT 305
           LRH +       D  G      G   DIT RK AE+  RR   ++RA++ N   G     
Sbjct: 428 LRHFINRGRLFWDARGQPLRASGTTQDITERKLAEEEYRRQSTQLRAVLQNMPQGISVFD 487

Query: 306 PEGYITESNPAMCKLLGL 323
               +   N  M ++LGL
Sbjct: 488 EHLRLQLWNEGMREVLGL 505