Pairwise Alignments

Query, 607 a.a., sensory box/GGDEF domain protein (TIGR) from Desulfovibrio vulgaris Hildenborough JW710

Subject, 935 a.a., PAS domain S-box/diguanylate cyclase (GGDEF) domain-containing protein from Dechlorosoma suillum PS

 Score =  151 bits (382), Expect = 1e-40
 Identities = 145/475 (30%), Positives = 206/475 (43%), Gaps = 55/475 (11%)

Query: 137 KTIEGWVMDVTELDHRKEGLRDAHRFLQNVVDALPCPLFF----KDMNGAYTLFNHAFSD 192
           +  +G V D+T+L   ++ L    R  + +   +P  L+      D +  +   +    +
Sbjct: 111 RAADGTVEDITDLKRVEQALNSMRRQREELASHVPGMLYQYRLRPDGSSHFPYASARIQE 170

Query: 193 MLGLTPENLQGKNADDIAPPDLAAVYHSMDQALLDAKGPASQRYESAFTTPHGLRHVLFD 252
           + G+ PE++      + A P  AA+ H  D+   D      Q    +    H    V F 
Sbjct: 171 IYGVAPEDVV-----EDATPAFAAL-HPEDR---DRVHETIQASGQSLALWHDEYRVQFP 221

Query: 253 KATVVDDEGTAR------GLV---GIITDITGRKQAEDALRRVEARIRALVHNASDGFFS 303
              V+  EG A       G +   G I D+T R+++ + LR + A++     +A +G   
Sbjct: 222 DGRVIWVEGEASPEAMPDGSILWHGYIHDVTSRRRSAEELR-LAAKV---FEHAGEGILV 277

Query: 304 VTPEGYITESNPAMCKLLGLKVAPSSGERGELTCVAPDDDESSDANRAQNILNLPDMFAE 363
              +G+I   N A   + G       G+   L      DDE                   
Sbjct: 278 TDAQGHIVNVNRAFSVITGYAREEVMGQTPRLLESDRYDDEFYQT--------------- 322

Query: 364 GREAWDAAL-HRLGTGAPPAPFEVRVRRDDGQTVWLSLALWPVDSVPEEDGPPPAVEGMA 422
              AW A   H    G      E+  RR +G       AL  + +VP+  G       M 
Sbjct: 323 ---AWQALREHDYWHG------ELWCRRKNGSQF---AALLTISAVPDMRGNIEHYAAMF 370

Query: 423 HDITAHKLAEMDLTRRIVTDPLTGLFNRAHMEDMLPRMLTRAAEDGRTLGLLFIDLDGFK 482
            DITA K  +  L R    D LTGL NR  + D L + + +    G  L ++FIDLDGFK
Sbjct: 371 SDITALKENQQQLERVAHYDLLTGLPNRLLLGDRLKQAIAQTRRRGMHLAVVFIDLDGFK 430

Query: 483 AVNDTYGHAVGDTLLQQVAGRLRRRLRHTDIAIRLGGDEFAVLLWDVAGKEAVERIGAGI 542
            VND +GHAVGD LL  ++ R+ + LR  D   RLGGDEF  +L D+        I   +
Sbjct: 431 KVNDQHGHAVGDKLLSVLSRRMTQVLREGDTLARLGGDEFVAVLVDLPDISLSVPILDRL 490

Query: 543 LSIMAPAFTCTDIPCSVSASIGASLYPQHAD-DAPSLLRLADEAMYRAKAEGKNR 596
           + + A      D  C VSASIG S YPQ  D DA  LLR AD+AMY AK  GKNR
Sbjct: 491 IEVAAQPVPIGDALCEVSASIGVSYYPQGEDIDADQLLRQADQAMYFAKQAGKNR 545



 Score = 29.3 bits (64), Expect = 8e-04
 Identities = 40/143 (27%), Positives = 56/143 (39%), Gaps = 33/143 (23%)

Query: 296 NASDGFFSVTPEGYITESNPAMCKLLGLKV-APSSGERGELTCVAPDDDESSDANRAQNI 354
           NA  G + +     +   +   C++LGL V AP + ER  L C+ P+D    D       
Sbjct: 18  NAHFGSWHLDLGSQLLTCSDEACRVLGLDVGAPIAFER-FLQCIHPEDRPLFD------- 69

Query: 355 LNLPDMFAEGREAWDAALHRLGTGAPPAPFEVRVR-RDDGQTVWLSL-ALWPVDSVPEED 412
                       AWDAA+            ++R R    GQ  W+ L A +  D+     
Sbjct: 70  -----------RAWDAAM-------CGKSLDLRYRIVSGGQVRWIHLRATFKGDA----S 107

Query: 413 GPPPAVEGMAHDITAHKLAEMDL 435
           G P A +G   DIT  K  E  L
Sbjct: 108 GRPRAADGTVEDITDLKRVEQAL 130