Pairwise Alignments

Query, 607 a.a., sensory box/GGDEF domain protein (TIGR) from Desulfovibrio vulgaris Hildenborough JW710

Subject, 1158 a.a., PAS domain S-box/diguanylate cyclase (GGDEF) domain-containing protein from Dechlorosoma suillum PS

 Score =  137 bits (345), Expect = 3e-36
 Identities = 162/579 (27%), Positives = 245/579 (42%), Gaps = 70/579 (12%)

Query: 43  LFDDLPV--GVFRSTLDGEHLLYANTSLAHLFGWPDAGAMIEGQTPRDLYASPTARDDIL 100
           +FD  PV  GV R       L+ AN +   LFG     A+  GQT    Y +P    D  
Sbjct: 368 IFDASPVVIGVVRDRC----LIQANRAFERLFGVSLETAL--GQTVVGYYPTPEEFADFG 421

Query: 101 QRLQQA---GEMTTDVIHLQRPGHAQRACILHLRIDNAMKTIEGWVMDVTELD---HRKE 154
           Q+L  A   G +   +   +R          + R  +A +   G ++ + ++D   H++E
Sbjct: 422 QQLYPAVADGRVAHFLRRFRRADGTLFWANFYARQIDAQQPQRGIIIVIEDVDQARHQEE 481

Query: 155 GLRDAH-RFLQNVVDALPCPLFFKDMNGAYTLFNHAFSDMLGLTPENLQGKNADDIAPPD 213
            LR++  R+ Q   +     L     +GA    N A +D  G   + L+  N   +    
Sbjct: 482 VLRESEERYRQMFENNTSIKLLIDAGDGAIVDANPAAADFYGYPLDTLRRMNIAQLNQLS 541

Query: 214 LAAVYHSMDQALLDAKGPASQRYESAFTTPHGLRHVLFDKATVVDDEGTARG---LVGII 270
           +  V   M  AL D +    +RY   F   H L      +  V       RG   L  II
Sbjct: 542 VEEVRAEM--ALADQQ---QRRY---FNFRHRLASGEVREVEVHSGPVLLRGRRLLYSII 593

Query: 271 TDITGRKQAEDALRRVEARIRALVHNASDGFFSVTPEGYITESNPAMCKLLGLKVAPSSG 330
            DIT R++AE+ LR + A++      AS+G         I   N A  ++ G   A   G
Sbjct: 594 HDITARRRAEEQLR-LSAKV---FEGASEGIVICDRNNRIMSVNRAFVEITGYAEAEVQG 649

Query: 331 ERGELTCVAPDDDESSDANRAQNILNLPDMFAEGREAWDAAL-----HRLGTGAPPAPFE 385
                              R   +LN       GR   DAA      H L T A     E
Sbjct: 650 -------------------RDPRVLN------SGRH--DAAFFANLWHHLKT-AGTWQGE 681

Query: 386 VRVRRDDGQTV--WLSLALWPVDSVPEEDGPPPAVEGMAHDITAHKLAEMDLTRRIVTDP 443
           +  RR  G+    WLS+      +V +E G       +  D++  K  E  +      D 
Sbjct: 682 IWNRRKGGEVYPEWLSIT-----TVRDEAGEVSNYVAVFADVSERKRNEEHIRFLAEHDY 736

Query: 444 LTGLFNRAHMEDMLPRMLTRAAEDGRTLGLLFIDLDGFKAVNDTYGHAVGDTLLQQVAGR 503
           LTGL NR+ + D L + +  A  +  +L L+FIDLD FK +ND+ GH VGD LLQ+V  R
Sbjct: 737 LTGLPNRSLLHDRLQQAIALAERNSESLALMFIDLDRFKNINDSLGHQVGDQLLQEVGRR 796

Query: 504 LRRRLRHTDIAIRLGGDEFAVLLWDVAGKEAVERIGAGILSIMAPAFTCTDIPCSVSASI 563
           ++  +R  D   R GGDEF +LL  +   +   R+   +L  +   +        ++ASI
Sbjct: 797 IQACVRSADTVSRPGGDEFIILLPSIETPQDAARVAEKLLESLNRPYQLGGHELVITASI 856

Query: 564 GASLYPQHADDAPSLLRLADEAMYRAKAEGKNRMAFAGP 602
           G +++P+   D  +L++ AD AMY +K  G++   F  P
Sbjct: 857 GIAVFPEDGRDFQTLVKNADAAMYYSKEAGRDSFHFFTP 895