Pairwise Alignments

Query, 607 a.a., sensory box/GGDEF domain protein (TIGR) from Desulfovibrio vulgaris Hildenborough JW710

Subject, 874 a.a., PAS domain S-box/diguanylate cyclase (GGDEF) domain-containing protein from Dechlorosoma suillum PS

 Score =  146 bits (369), Expect = 3e-39
 Identities = 134/445 (30%), Positives = 194/445 (43%), Gaps = 49/445 (11%)

Query: 161 RFLQNVVDALPCPLFFKDMNGAYTLFNHAFSDMLGLTPENLQ----GKNADDIAPPDLAA 216
           R+L+ +++  P  +   D     T  N  F++++G+  E LQ     K  D    P LAA
Sbjct: 206 RYLR-LLEFCPTGIIHYDTELHITYSNQQFANIIGVPLERLQDLDMAKLQDQRPLPALAA 264

Query: 217 VYHSMDQALLDAKGPASQRYESAFTTPHGLRH--VLFDKATVVDDEGTARGLVGIITDIT 274
           V               + R+E  +      R   V    A V+D  G   G + I+ D T
Sbjct: 265 VLEGR-----------TGRFEGEYRASLSGRQLWVSLVAAPVLDQGGQLLGGIAIVEDAT 313

Query: 275 GRKQAEDALRRVEARIRALVHNASDGFFSVTPEGYITESNPAMCKLLGLKVAPSSGERGE 334
            RK+AE  LR++    RA+  + +    + T  G I   NP   +  G     + G +  
Sbjct: 314 ERKRAELQLRQLS---RAVEQSPATIVITDT-NGVIEYVNPKFTRTTGYSAEEAVGLKPS 369

Query: 335 LTCVAPDDDESSDANRAQNILNLPDMFAEGREAWDAALHRLGTGAPPAPFEVRVRRDDGQ 394
           +          S     +    L    A G + W+   H               RR +G+
Sbjct: 370 VL--------KSGETPLEVYQELWSTIASGGQ-WEGVFHN--------------RRRNGE 406

Query: 395 TVWLSLALWPVDSVPEEDGPPPAVEGMAHDITAHKLAEMDLTRRIVTDPLTGLFNRAHME 454
             W    + P+    +      AV+    DIT  +  E  + +    D LTGL NR  + 
Sbjct: 407 LYWEHATISPITDDNQRITHFVAVK---EDITEKRRQEDRIHQLAYFDELTGLPNRTLLH 463

Query: 455 DMLPRMLTRAAEDGRTLGLLFIDLDGFKAVNDTYGHAVGDTLLQQVAGRLRRRLRHTDIA 514
           D + + L  A  +  TL LLFIDLD FK VND+ GH  GD LLQ VA RL+  +R +D  
Sbjct: 464 DRVSQCLAAAEREQETLALLFIDLDNFKTVNDSLGHFTGDRLLQSVAQRLKGCVRDSDTV 523

Query: 515 IRLGGDEFAVLLWDVAGKEAVERIGAGILSIMAPAFTCTDIPCSVSASIGASLYPQHADD 574
            RLGGDEF V+L D A  +   ++   I+  +   F       +V+ SIG SL+P  A D
Sbjct: 524 SRLGGDEFVVVLAD-AQLDGASQVARKIIDRVGQPFVIDGHQLTVTPSIGISLFPHDARD 582

Query: 575 APSLLRLADEAMYRAKAEGKNRMAF 599
             SLL+ AD AMY+AK  G+N   F
Sbjct: 583 FQSLLKNADTAMYQAKESGRNAYQF 607