Pairwise Alignments

Query, 607 a.a., sensory box/GGDEF domain protein (TIGR) from Desulfovibrio vulgaris Hildenborough JW710

Subject, 953 a.a., PAS domain S-box/diguanylate cyclase (GGDEF) domain-containing protein from Dechlorosoma suillum PS

 Score =  190 bits (483), Expect = 2e-52
 Identities = 146/452 (32%), Positives = 207/452 (45%), Gaps = 43/452 (9%)

Query: 156 LRDAHRFLQNVVDALPCPLFFKDMNGAYTLFNHAFSDMLGLTPENLQGKNADDIAPPDLA 215
           L++  +F+  +++A+P PLF+KD  G Y   N AF   LG     L GK+  D+AP +LA
Sbjct: 272 LQEHVQFMHTLIEAIPSPLFYKDAQGRYVGCNEAFLTYLGKERHELLGKSVYDLAPKELA 331

Query: 216 AVYHSMDQALLDAKGPASQRYESAFTTPHGLRH-VLFDKATVVDDEGTARGLVGIITDIT 274
            +Y + D+ L D   P  Q YES      G +H V+++KAT +D EG   GLVG++ DIT
Sbjct: 332 DIYAAADRQLFD--NPGKQVYESQACYADGSKHDVIYNKATFMDAEGRVAGLVGVMVDIT 389

Query: 275 GRKQAEDALRRVEARIRALVHNASDGFFSVT-PEGYITESNPAMCKLLGLKVAPSSGERG 333
            RK+ E+     E R+ A V + S+  F VT  +  I   N A C+  G       G   
Sbjct: 390 ERKRQEE-----ELRLAAKVFDTSNEAFLVTDADNNIRSVNRAFCETTGYSAEEVLGRNP 444

Query: 334 ELTCVAPDDDESSDANRAQNILNLPDMFAEGREAWDAALHRLGTGAPPAPFEVRVRRDDG 393
            L      D                      R+ W+ AL+  G        E+  RR  G
Sbjct: 445 RLLSSGHHDKTFY------------------RQMWE-ALNSQGYWQG----EIYDRRKSG 481

Query: 394 QTV--WLSLALWPVDSVPEEDGPPPAVEGMAHDITAHKLAEMDLTRRIVTDPLTGLFN-- 449
           +    W       ++ V ++ G       +  DI+  K  E  L      D LTGL N  
Sbjct: 482 EIYPKWTR-----INVVKDDQGRVVNHVAVFSDISDRKALEERLQFLAQHDHLTGLPNRN 536

Query: 450 --RAHMEDMLPRMLTRAAEDGRTLGLLFIDLDGFKAVNDTYGHAVGDTLLQQVAGRLRRR 507
             R  +E  +   + R A     + LL +DLD FK +ND+ GH  GD LL+ V  RL+  
Sbjct: 537 LLRLRLEQAVESAMERGAGGINPVALLLLDLDHFKTINDSLGHHAGDQLLRTVVKRLKNI 596

Query: 508 LRHTDIAIRLGGDEFAVLLWDVAGKEAVERIGAGILSIMAPAFTCTDIPCSVSASIGASL 567
           LR +    R GGDEF ++L        V R    +L+ +A  F     P S++ SIG SL
Sbjct: 597 LRESSTLCRQGGDEFLIVLPQAQDLARVSRAAETVLAALATPFEVDGHPLSITGSIGISL 656

Query: 568 YPQHADDAPSLLRLADEAMYRAKAEGKNRMAF 599
            P    D  +LL+ AD A+  AK  G+N   F
Sbjct: 657 APDDGSDFDTLLKKADTALVHAKQSGRNAYRF 688



 Score = 33.5 bits (75), Expect = 4e-05
 Identities = 36/148 (24%), Positives = 60/148 (40%), Gaps = 13/148 (8%)

Query: 141 GWVMDVTELDHRKEGLRDAHRFLQNVVDALPCPLFFKDMNGAYTLFNHAFSDMLGLTPEN 200
           G ++D+TE   ++E LR A +      +A        D +      N AF +  G + E 
Sbjct: 383 GVMVDITERKRQEEELRLAAKVFDTSNEAF----LVTDADNNIRSVNRAFCETTGYSAEE 438

Query: 201 LQGKNADDIAPPDLAAVYHSMDQALLDAKGPASQRYESAFTTPHGLRHVLFDKAT----V 256
           + G+N     P  L++ +H         +   SQ Y             ++ K T    V
Sbjct: 439 VLGRN-----PRLLSSGHHDKTFYRQMWEALNSQGYWQGEIYDRRKSGEIYPKWTRINVV 493

Query: 257 VDDEGTARGLVGIITDITGRKQAEDALR 284
            DD+G     V + +DI+ RK  E+ L+
Sbjct: 494 KDDQGRVVNHVAVFSDISDRKALEERLQ 521