Pairwise Alignments

Query, 607 a.a., sensory box/GGDEF domain protein (TIGR) from Desulfovibrio vulgaris Hildenborough JW710

Subject, 972 a.a., PAS domain S-box/diguanylate cyclase (GGDEF) domain-containing protein from Dechlorosoma suillum PS

 Score =  149 bits (375), Expect = 7e-40
 Identities = 139/459 (30%), Positives = 190/459 (41%), Gaps = 38/459 (8%)

Query: 146 VTELDHRKEGLRDAHRFLQNVVDALPCPLFFKDMNGAYTLFNHAFSDMLGLTPENLQGKN 205
           + EL      L  +H FL N+ + L   +   D  G  T  N     +LG  P  L G++
Sbjct: 273 MVELKKSALELGHSHAFLDNIANTLAEGILALDRGGRITFANQRAEALLGAAPGGLLGRD 332

Query: 206 ADDIAPPDLA-AVYHSMDQALLDAKGPASQRYESAFTTPHGLRHVLFDKATVVDDEGTA- 263
           A  +  P  A A    + +AL  A G   +  +    +      V    A +   EG A 
Sbjct: 333 AATVLWPGAAPAEVSGLARAL--ATGAVFEGEDDFVRSDGSAFPVAVLGAPLRGGEGDAD 390

Query: 264 -RGLVGIITDITGRKQAEDALRRVEARIRALVHNASDGFFSVTPEGYITESNPAMCKLLG 322
             G V    DI+  KQAE  L  + AR+     +  +        G I   NPA  ++ G
Sbjct: 391 QAGYVASFRDISEIKQAEARLH-LAARV---FDSLGEAMVVTDARGRIQSVNPAFSEVTG 446

Query: 323 LKVAPSSGERGELTCVAPDDDESSDANRAQNILNLPDMFAEGREAWDAALHRLGTGAPPA 382
              A + G        +   D +  A   Q++        + +  W              
Sbjct: 447 YSEADARGRAPGHILASGQHDPAFYAQMWQSL--------QEQGKWQG------------ 486

Query: 383 PFEVRVRRDDGQTV--WLSLALWPVDSVPEEDGPPPAVEGMAHDITAHKLAEMDLTRRIV 440
             EV  RR  G+T   WLS+      ++ +  G      G+  DIT  K AE  +     
Sbjct: 487 --EVINRRKSGETYPEWLSIT-----AIKDGAGQVSQYVGLFTDITDRKQAEAHIHHLAY 539

Query: 441 TDPLTGLFNRAHMEDMLPRMLTRAAEDGRTLGLLFIDLDGFKAVNDTYGHAVGDTLLQQV 500
            DPLTGL NR    D L   L +A    R L +L +DLD FKAVNDT GH  GD LL++V
Sbjct: 540 HDPLTGLPNRRLFYDRLENALRQAHRSRRKLAVLLLDLDRFKAVNDTLGHDQGDLLLKEV 599

Query: 501 AGRLRRRLRHTDIAIRLGGDEFAVLLWDVAGKEAVERIGAGILSIMAPAFTCTDIPCSVS 560
             RL   LR  D   RLGGDEF +LL +V   E    +   +L+         +     S
Sbjct: 600 GARLSLCLREGDTLARLGGDEFVLLLPEVLSAEDASIVAGKLLAQFDQPVRLGEREIFAS 659

Query: 561 ASIGASLYPQHADDAPSLLRLADEAMYRAKAEGKNRMAF 599
            SIG +LYP   +D  SLL+ AD AMY AK  G+    F
Sbjct: 660 TSIGIALYPADGEDGESLLKHADVAMYAAKDGGRAAYRF 698